Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU80382 | Sorghum | extracellular, vacuole | 78.99 | 79.66 |
| Os09t0334600-00 | Rice | mitochondrion | 58.82 | 79.55 |
| Zm00001d032266_P001 | Maize | endoplasmic reticulum, extracellular | 76.47 | 77.12 |
| Solyc12g008470.1.1 | Tomato | mitochondrion | 47.06 | 66.67 |
| VIT_09s0002g03420.t01 | Wine grape | cytosol | 49.58 | 60.2 |
| KRH74256 | Soybean | endoplasmic reticulum, golgi | 56.3 | 56.3 |
| AT1G60660.1 | Thale cress | endoplasmic reticulum | 53.78 | 52.89 |
| CDY24550 | Canola | extracellular, golgi, vacuole | 52.94 | 52.07 |
| CDY34133 | Canola | endoplasmic reticulum, extracellular, golgi | 52.94 | 51.64 |
| Bra031489.1-P | Field mustard | extracellular, golgi, vacuole | 52.1 | 51.24 |
| GSMUA_Achr9P05320_001 | Banana | endoplasmic reticulum, plasma membrane | 59.66 | 48.63 |
| CDY46984 | Canola | endoplasmic reticulum | 52.1 | 46.97 |
| KRH07276 | Soybean | endoplasmic reticulum, plasma membrane | 57.98 | 45.1 |
| CDY61511 | Canola | endoplasmic reticulum, golgi | 30.25 | 42.86 |
| CDY44610 | Canola | endoplasmic reticulum | 29.41 | 41.67 |
| Bra027144.1-P | Field mustard | nucleus | 43.7 | 25.87 |
| Os02t0649800-01 | Rice | plasma membrane | 29.41 | 25.36 |
| Os10t0518200-01 | Rice | plasma membrane, plastid | 19.33 | 22.12 |
| Os01t0971500-01 | Rice | cytosol, plasma membrane | 24.37 | 21.48 |
| Os05t0108800-01 | Rice | plasma membrane | 24.37 | 21.17 |
| Os12t0223300-01 | Rice | cytosol, peroxisome, plastid | 23.53 | 18.67 |
Protein Annotations
| Gene3D:3.10.120.10 | MapMan:35.1 | EntrezGene:4345457 | ProteinID:BAD05422.1 | ProteinID:BAF23622.1 | ProteinID:BAT05256.1 |
| InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | ProteinID:EEE68616.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0020037 | GO:GO:0046872 | InterPro:IPR001199 | InterPro:IPR036400 | EnsemblPlantsGene:Os08g0386300 | EnsemblPlants:Os08t0386300-02 |
| PFAM:PF00173 | PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF63 |
| UniProt:Q6ZA21 | SMART:SM01117 | SUPFAM:SSF55856 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000022F22E |
| RefSeq:XP_015651041.1 | SEG:seg | : | : | : | : |
Description
Cytochrome b5 domain containing protein. (Os08t0386300-01);Cytochrome b5 domain containing protein. (Os08t0386300-02)
Coordinates
chr8:-:18221715..18223954
Molecular Weight (calculated)
13146.7 Da
IEP (calculated)
6.095
GRAVY (calculated)
-0.035
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIIVILSLV VLLVLGALFV LPKSRNKGKA KEASSNAKSV TFRSYTKEEI SAHNTRTDCW VIIKDKVYDV TSYVEEHPGG DAILNNAGGD STEGFFGPQH
101: GFRVFEIIED FCIGELKHS
101: GFRVFEIIED FCIGELKHS
001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H
101: GPQHATRVFD MIEDFYIGEL H
Arabidopsis Description
CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.