Factsheet for Os02t0649800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
plastid 1
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0125300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46650.1	Os02t0125300-01	AT5G47120.1	19054355

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G240700.1	Wheat	cytosol, golgi, mitochondrion	73.19	71.63
TraesCS6D01G222900.1	Wheat	cytosol	73.19	71.13
TraesCS6B01G284000.1	Wheat	cytosol	73.19	71.13
Zm00001d017425_P001	Maize	cytosol	70.29	69.78
HORVU6Hr1G061420.4	Barley	cytosol	66.67	56.44
Os10t0518200-01	Rice	plasma membrane, plastid	37.68	50.0
Solyc06g053170.2.1	Tomato	cytosol, plastid	13.77	48.72
KRG97223	Soybean	endoplasmic reticulum	48.55	47.52
AT2G46650.1	Thale cress	cytosol	44.93	46.97
KRH68944	Soybean	cytosol	47.83	46.81
Bra039268.1-P	Field mustard	cytosol	44.2	45.52
CDX80035	Canola	cytosol	44.2	45.52
CDY27310	Canola	cytosol	44.2	45.52
CDY61721	Canola	cytosol	44.2	45.52
Os05t0108800-01	Rice	plasma membrane	44.93	45.26
OQU85747	Sorghum	mitochondrion	69.57	44.86
CDY41545	Canola	cytosol	43.48	44.78
Bra004518.1-P	Field mustard	cytosol	43.48	44.78
Os01t0971500-01	Rice	cytosol, plasma membrane	43.48	44.44
KRH47845	Soybean	endoplasmic reticulum	44.2	42.96
KRH06410	Soybean	cytosol	44.2	41.78
Os09t0334600-00	Rice	mitochondrion	25.36	39.77
Os12t0223300-01	Rice	cytosol, peroxisome, plastid	34.78	32.0
Os08t0386300-02	Rice	endoplasmic reticulum, extracellular	25.36	29.41

Protein Annotations

MapMan:21.9.1.7.1.3	Gene3D:3.10.120.10	EntrezGene:4330160	EMBL:AK066861	ProteinID:BAD25582.1	ProteinID:BAD26552.1
ProteinID:BAF09499.1	ProteinID:BAS80046.1	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS	ProteinID:EAZ24005.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0020037
GO:GO:0046872	InterPro:IPR001199	InterPro:IPR036400	EnsemblPlantsGene:Os02g0649800	EnsemblPlants:Os02t0649800-01	PFAM:PF00173
PRINTS:PR00363	ScanProsite:PS00191	PFscan:PS50255	PANTHER:PTHR19359	PANTHER:PTHR19359:SF30	UniProt:Q6H3Z7
SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI00003B44DE	RefSeq:XP_015625413.1	:

Description

Similar to Cytochrome B5 homolog (Fragment). (Os02t0649800-01)

Coordinates

chr2:-:26163137..26164221

Molecular Weight (calculated)

14662.4 Da

IEP (calculated)

4.689

GRAVY (calculated)

-0.041

Length

138 amino acids

Sequence
(BLAST)

001: MAGGKAVYSF QEVSKHNDRK DCWLIIAGKV YDVSPFMEEH PGGDEVLLAC TGKDATADFN DIGHTATAKE LMPQYCIGEV DASTVPAKPA YRVVSEDASA
101: KPDAASQGAW LTALQLAVPV VLLGLAYALQ DFAKTKTA

Best Arabidopsis Sequence Match ( AT5G53560.1 )
(BLAST)

001: MSSDRKVLSF EEVSKHNKTK DCWLIISGKV YDVTPFMDDH PGGDEVLLSS TGKDATNDFE DVGHSDTARD MMDKYFIGEI DSSSVPATRT YVAPQQPAYN
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD

Arabidopsis Description

CYTB5-ECB5-E [Source:UniProtKB/TrEMBL;Acc:A0A178USU5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.