Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004518.1-P | Field mustard | cytosol | 87.12 | 85.82 |
| CDY41545 | Canola | cytosol | 87.12 | 85.82 |
| CDX80035 | Canola | cytosol | 86.36 | 85.07 |
| CDY61721 | Canola | cytosol | 84.09 | 82.84 |
| CDY27310 | Canola | cytosol | 84.09 | 82.84 |
| Bra039268.1-P | Field mustard | cytosol | 83.33 | 82.09 |
| KRG97223 | Soybean | endoplasmic reticulum | 54.55 | 51.06 |
| KRH68944 | Soybean | cytosol | 51.52 | 48.23 |
| AT5G53560.1 | Thale cress | cytosol | 48.48 | 47.76 |
| TraesCS6A01G240700.1 | Wheat | cytosol, golgi, mitochondrion | 49.24 | 46.1 |
| Zm00001d017425_P001 | Maize | cytosol | 48.48 | 46.04 |
| TraesCS6D01G222900.1 | Wheat | cytosol | 48.48 | 45.07 |
| TraesCS6B01G284000.1 | Wheat | cytosol | 48.48 | 45.07 |
| AT5G48810.1 | Thale cress | cytosol | 47.73 | 45.0 |
| Os02t0649800-01 | Rice | plasma membrane | 46.97 | 44.93 |
| AT1G26340.1 | Thale cress | cytosol | 44.7 | 43.7 |
| AT2G32720.1 | Thale cress | cytosol | 43.18 | 42.54 |
| KRH47845 | Soybean | endoplasmic reticulum | 43.94 | 40.85 |
| KRH06410 | Soybean | cytosol | 43.94 | 39.73 |
| HORVU6Hr1G061420.4 | Barley | cytosol | 45.45 | 36.81 |
| Solyc06g053170.2.1 | Tomato | cytosol, plastid | 10.61 | 35.9 |
| OQU85747 | Sorghum | mitochondrion | 47.73 | 29.44 |
| AT1G60660.1 | Thale cress | endoplasmic reticulum | 21.21 | 23.14 |
Protein Annotations
| MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | EntrezGene:819277 | UniProt:A0A178VYU9 | ProteinID:AAC69922.1 | ProteinID:AAM15242.1 |
| ProteinID:AEC10735.1 | EMBL:AK175189 | EMBL:AK175442 | ArrayExpress:AT2G46650 | EnsemblPlantsGene:AT2G46650 | RefSeq:AT2G46650 |
| TAIR:AT2G46650 | RefSeq:AT2G46650-TAIR-G | EnsemblPlants:AT2G46650.1 | TAIR:AT2G46650.1 | EMBL:AY087658 | Symbol:B5 #1 |
| EMBL:BT025600 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0020037 | GO:GO:0046872 |
| GO:GO:0055114 | InterPro:IPR001199 | InterPro:IPR036400 | RefSeq:NP_182188.1 | ProteinID:OAP09992.1 | PFAM:PF00173 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00363 |
| ScanProsite:PS00191 | PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF43 | UniProt:Q9ZNV4 | SMART:SM01117 |
| SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI000009C58E | SEG:seg | : | : |
Description
CYTB5-CCytochrome B5 isoform C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV4]
Coordinates
chr2:+:19151481..19152739
Molecular Weight (calculated)
14873.9 Da
IEP (calculated)
5.991
GRAVY (calculated)
-0.234
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLISFHDV AKHKCKNDCW ILIHGKVYDI STFMDEHPGG DNVLLAVTGK DASIDFEDVN HSKDAKELMK KYCIGDVDQS TVPVTQQYIP PWEKESTAAE
101: TTKEESGKKL LIYLIPLLIL GVAFALRFYN NK
101: TTKEESGKKL LIYLIPLLIL GVAFALRFYN NK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.