Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86279 | Canola | cytosol | 85.0 | 86.23 |
| Bra037461.1-P | Field mustard | cytosol | 84.29 | 85.51 |
| CDX85364 | Canola | cytosol | 83.57 | 84.78 |
| CDY00045 | Canola | cytosol | 83.57 | 83.57 |
| CDY19937 | Canola | cytosol | 82.14 | 82.14 |
| Bra036160.1-P | Field mustard | cytosol | 81.43 | 81.43 |
| PGSC0003DMT400045531 | Potato | cytosol | 71.43 | 75.19 |
| Solyc09g061230.2.1 | Tomato | cytosol | 70.71 | 74.44 |
| PGSC0003DMT400003091 | Potato | cytosol | 69.29 | 71.85 |
| Solyc06g007930.2.1 | Tomato | cytosol, endoplasmic reticulum, plastid, unclear | 68.57 | 71.11 |
| VIT_07s0005g06290.t01 | Wine grape | cytosol | 66.43 | 69.92 |
| PGSC0003DMT400051945 | Potato | cytosol | 65.0 | 68.94 |
| KRG99574 | Soybean | cytosol, endoplasmic reticulum | 66.43 | 68.89 |
| Solyc06g083440.2.1 | Tomato | cytosol | 65.0 | 68.42 |
| KRH66053 | Soybean | endoplasmic reticulum | 65.71 | 68.15 |
| GSMUA_Achr3P19410_001 | Banana | cytosol | 65.0 | 67.91 |
| AT2G32720.1 | Thale cress | cytosol | 65.0 | 67.91 |
| TraesCS3D01G529500.1 | Wheat | cytosol, golgi, unclear | 65.0 | 66.42 |
| TraesCS5D01G152500.1 | Wheat | golgi | 63.57 | 66.42 |
| TraesCS3A01G524000.2 | Wheat | cytosol, golgi, plastid | 64.29 | 65.69 |
| Os05t0108800-01 | Rice | plasma membrane | 64.29 | 65.69 |
| TraesCS5A01G138900.1 | Wheat | cytosol, golgi | 62.86 | 65.67 |
| EES17559 | Sorghum | cytosol | 62.14 | 65.41 |
| EES02143 | Sorghum | cytosol | 62.86 | 65.19 |
| HORVU5Hr1G045040.1 | Barley | cytosol, plasma membrane | 62.14 | 64.93 |
| GSMUA_Achr6P06700_001 | Banana | cytosol | 62.14 | 64.93 |
| Os01t0971500-01 | Rice | cytosol, plasma membrane | 62.14 | 64.44 |
| TraesCS5B01G138200.1 | Wheat | cytosol, golgi | 60.71 | 63.43 |
| AT5G53560.1 | Thale cress | cytosol | 57.14 | 59.7 |
| HORVU3Hr1G114360.3 | Barley | plasma membrane | 63.57 | 51.45 |
| AT2G46650.1 | Thale cress | cytosol | 45.0 | 47.73 |
| AT1G26340.1 | Thale cress | cytosol | 35.71 | 37.04 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 57.86 | 33.06 |
| Zm00001d035685_P001 | Maize | mitochondrion | 32.86 | 29.68 |
| AT1G60660.1 | Thale cress | endoplasmic reticulum | 20.71 | 23.97 |
Protein Annotations
| MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | EntrezGene:834939 | UniProt:A0A178UMW9 | EMBL:AB007802 | ProteinID:AED95727.1 |
| EMBL:AF370256 | ArrayExpress:AT5G48810 | EnsemblPlantsGene:AT5G48810 | RefSeq:AT5G48810 | TAIR:AT5G48810 | RefSeq:AT5G48810-TAIR-G |
| EnsemblPlants:AT5G48810.1 | TAIR:AT5G48810.1 | Symbol:ATB5-B | EMBL:AY063073 | EMBL:AY086738 | Unigene:At.23051 |
| ProteinID:BAB09434.1 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0020037 | GO:GO:0042742 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR001199 |
| InterPro:IPR036400 | RefSeq:NP_199692.1 | ProteinID:OAO94697.1 | PFAM:PF00173 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00363 | ScanProsite:PS00191 |
| PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF69 | UniProt:Q9ZWT2 | SMART:SM01117 | SUPFAM:SSF55856 |
| TMHMM:TMhelix | UniParc:UPI00000A702A | : | : | : | : |
Description
CYTB5-DCytochrome B5 isoform D [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWT2]
Coordinates
chr5:-:19789067..19790372
Molecular Weight (calculated)
15097.9 Da
IEP (calculated)
4.703
GRAVY (calculated)
-0.067
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGDGKVFTL SEVSQHSSAK DCWIVIDGKV YDVTKFLDDH PGGDEVILTS TGKDATDDFE DVGHSSTAKA MLDEYYVGDI DTATVPVKAK FVPPTSTKAV
101: ATQDKSSDFV IKLLQFLVPL LILGLAFGIR YYTKTKAPSS
101: ATQDKSSDFV IKLLQFLVPL LILGLAFGIR YYTKTKAPSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.