Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G46650.1 | CDY25984 | AT5G47120.1 | 19054355 |
| AT2G46650.1 | CDY28973 | AT5G47120.1 | 19054355 |
| AT2G46650.1 | CDY40569 | AT5G47120.1 | 19054355 |
| AT2G46650.1 | CDY43441 | AT5G47120.1 | 19054355 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004518.1-P | Field mustard | cytosol | 99.25 | 99.25 |
| CDY41545 | Canola | cytosol | 99.25 | 99.25 |
| CDY61721 | Canola | cytosol | 94.03 | 94.03 |
| CDY27310 | Canola | cytosol | 94.03 | 94.03 |
| AT2G46650.1 | Thale cress | cytosol | 85.07 | 86.36 |
| CDY47080 | Canola | cytosol | 47.76 | 47.76 |
| KRG97223 | Soybean | endoplasmic reticulum | 50.0 | 47.52 |
| CDX96233 | Canola | cytosol | 46.27 | 46.27 |
| CDY28830 | Canola | cytosol | 46.27 | 46.27 |
| CDY59638 | Canola | cytosol | 44.78 | 44.78 |
| KRH68944 | Soybean | cytosol | 47.01 | 44.68 |
| Os02t0649800-01 | Rice | plasma membrane | 45.52 | 44.2 |
| CDX84725 | Canola | cytosol | 43.28 | 43.28 |
| CDX79471 | Canola | cytosol | 43.28 | 43.28 |
| TraesCS6A01G240700.1 | Wheat | cytosol, golgi, mitochondrion | 45.52 | 43.26 |
| CDY19937 | Canola | cytosol | 44.78 | 42.86 |
| TraesCS6B01G284000.1 | Wheat | cytosol | 44.78 | 42.25 |
| TraesCS6D01G222900.1 | Wheat | cytosol | 44.78 | 42.25 |
| CDY00045 | Canola | cytosol | 44.03 | 42.14 |
| CDX86279 | Canola | cytosol | 43.28 | 42.03 |
| CDX85364 | Canola | cytosol | 43.28 | 42.03 |
| CDY19161 | Canola | cytosol | 41.79 | 41.79 |
| CDY23792 | Canola | cytosol | 41.79 | 41.79 |
| Zm00001d017425_P001 | Maize | cytosol | 43.28 | 41.73 |
| CDY14370 | Canola | cytosol | 47.01 | 40.38 |
| KRH47845 | Soybean | endoplasmic reticulum | 41.79 | 39.44 |
| KRH06410 | Soybean | cytosol | 42.54 | 39.04 |
| CDY12180 | Canola | cytosol | 44.78 | 38.46 |
| CDX85016 | Canola | cytosol | 38.06 | 37.78 |
| CDY16153 | Canola | cytosol | 37.31 | 37.04 |
| CDY47078 | Canola | nucleus | 32.09 | 36.44 |
| HORVU6Hr1G061420.4 | Barley | cytosol | 43.28 | 35.58 |
| Solyc06g053170.2.1 | Tomato | cytosol, plastid | 9.7 | 33.33 |
| CDY20247 | Canola | mitochondrion | 47.01 | 33.16 |
| OQU85747 | Sorghum | mitochondrion | 43.28 | 27.1 |
| CDY46984 | Canola | endoplasmic reticulum | 21.64 | 21.97 |
| CDY24550 | Canola | extracellular, golgi, vacuole | 19.4 | 21.49 |
| CDY34133 | Canola | endoplasmic reticulum, extracellular, golgi | 19.4 | 21.31 |
| CDY61511 | Canola | endoplasmic reticulum, golgi | 12.69 | 20.24 |
| CDY44610 | Canola | endoplasmic reticulum | 12.69 | 20.24 |
Protein Annotations
| MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | GO:A0A078CTA7 | EnsemblPlants:CDX80035 | ProteinID:CDX80035 | ProteinID:CDX80035.1 |
| InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0020037 |
| EnsemblPlantsGene:GSBRNA2T00132917001 | InterPro:IPR001199 | InterPro:IPR036400 | PFAM:PF00173 | PRINTS:PR00363 | ScanProsite:PS00191 |
| PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF43 | SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix |
| UniParc:UPI0004EEFD2A | SEG:seg | : | : | : | : |
Description
BnaA05g01210D
Coordinates
chrLK031819:+:1435809..1436815
Molecular Weight (calculated)
15087.9 Da
IEP (calculated)
5.991
GRAVY (calculated)
-0.323
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLISFHDV SKHKCKNDCW ILIHGKVYDI SSFIDEHPGG DNVLLAVTGK DASTDFDDVN HSNEAKETMK KYCIGDVDKS TVPVTAKYIP PWEKESTAET
101: TKEETGNKML VYLIPLLILG VAFFLRFYNN KQTS
101: TKEETGNKML VYLIPLLILG VAFFLRFYNN KQTS
001: MANLISFHDV AKHKCKNDCW ILIHGKVYDI STFMDEHPGG DNVLLAVTGK DASIDFEDVN HSKDAKELMK KYCIGDVDQS TVPVTQQYIP PWEKESTAAE
101: TTKEESGKKL LIYLIPLLIL GVAFALRFYN NK
101: TTKEESGKKL LIYLIPLLIL GVAFALRFYN NK
Arabidopsis Description
CYTB5-CCytochrome B5 isoform C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.