Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDX79039 | endoplasmic reticulum |
| CDX79274 | |
| CDX79471 | |
| CDX80035 | |
| CDX82608 | |
| CDX82806 | endoplasmic reticulum |
| CDX84725 | |
| CDX85016 | |
| CDX85364 | |
| CDX86279 | |
| CDX87424 | |
| CDX88489 | |
| CDX94025 | endoplasmic reticulum |
| CDX96233 | |
| CDY00045 | |
| CDY01156 | endoplasmic reticulum |
| CDY12180 | |
| CDY12709 | endoplasmic reticulum |
| CDY14177 | |
| CDY14370 | |
| CDY16153 | |
| CDY19161 | |
| CDY19937 | |
| CDY20247 | |
| CDY23792 | |
| CDY27310 | |
| CDY28830 | |
| CDY30294 | |
| CDY41545 | |
| CDY45897 | |
| CDY56511 | |
| CDY57944 | |
| CDY58482 | endoplasmic reticulum |
| CDY59638 | |
| CDY61721 | |
| CDY62140 | |
| CDY62141 | |
| CDY64741 | |
| CDY65340 | endoplasmic reticulum |
| CDY67023 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43441 | Canola | plasma membrane | 98.38 | 98.38 |
| CDY40569 | Canola | plasma membrane | 96.36 | 96.36 |
| AT5G47120.1 | Thale cress | plasma membrane | 94.33 | 94.33 |
| CDY28973 | Canola | plasma membrane | 93.93 | 93.93 |
| CDY33515 | Canola | endoplasmic reticulum, golgi | 33.6 | 87.37 |
| PGSC0003DMT400067509 | Potato | plasma membrane | 76.11 | 75.81 |
| VIT_00s1665g00010.t01 | Wine grape | golgi, plasma membrane, vacuole | 65.99 | 75.46 |
| KRH77301 | Soybean | plasma membrane | 70.45 | 71.31 |
| GSMUA_Achr7P07470_001 | Banana | plasma membrane | 69.23 | 70.95 |
| KRH57502 | Soybean | plasma membrane | 69.64 | 69.64 |
| TraesCS6D01G077000.1 | Wheat | plasma membrane | 69.23 | 69.23 |
| Os02t0125300-01 | Rice | plasma membrane | 69.64 | 69.08 |
| TraesCS6B01G113900.1 | Wheat | plasma membrane | 68.83 | 68.83 |
| TraesCS6A01G083200.1 | Wheat | peroxisome, plasma membrane, plastid, vacuole | 68.42 | 68.42 |
| GSMUA_Achr6P36970_001 | Banana | plasma membrane | 68.02 | 67.47 |
| EES04425 | Sorghum | plastid | 70.45 | 67.44 |
| Zm00001d053952_P001 | Maize | plasma membrane | 69.23 | 66.02 |
| KRH04210 | Soybean | plasma membrane | 65.59 | 65.85 |
| KRH28186 | Soybean | peroxisome | 69.64 | 62.77 |
| EER89024 | Sorghum | plasma membrane | 63.16 | 62.15 |
| Zm00001d045618_P001 | Maize | plasma membrane | 61.54 | 60.8 |
| HORVU6Hr1G014450.1 | Barley | nucleus | 69.23 | 54.63 |
| Zm00001d015091_P003 | Maize | mitochondrion, nucleus, peroxisome, plasma membrane | 70.85 | 53.03 |
| TraesCS1D01G018500.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 47.77 | 40.83 |
| KRH24687 | Soybean | extracellular | 19.43 | 40.68 |
| Solyc01g090000.1.1 | Tomato | plasma membrane | 27.94 | 28.75 |
Protein Annotations
| EnsemblPlants:CDY25984 | EnsemblPlantsGene:GSBRNA2T00033514001 | GO:A0A078GL54 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008219 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0043066 | InterPro:Bax_inhbtr1_CS | InterPro:Bax_inhibitor_1-related |
| PANTHER:PTHR23291 | PANTHER:PTHR23291:SF76 | PFAM:PF01027 | ProteinID:CDY25984 | ProteinID:CDY25984.1 | ScanProsite:PS01243 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EB2C33 | UniProt:A0A078GL54 | MapMan:27.2.6 | : |
Description
BnaC09g20030DBnaC09g20030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GL54]
Coordinates
chrLK032183:-:557650..559543
Molecular Weight (calculated)
27494.9 Da
IEP (calculated)
8.567
GRAVY (calculated)
0.492
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSFSSFFDS QPGSRSWSYD SLKNLHQISP SVQNHLKRVY LTLCCALVAS AFGAYLHVLW NIGGILTTIA CCGTMIWLLS CPPYEQQKRL SLLFMSAVLE
101: GASVGPLIKV AVDFDPSILI TAFVGTAIAF ICFSGAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHALTLFTDF VAVFVRVLII MLKNSADKEE KKKKRRN
101: GASVGPLIKV AVDFDPSILI TAFVGTAIAF ICFSGAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHALTLFTDF VAVFVRVLII MLKNSADKEE KKKKRRN
001: MDAFSSFFDS QPGSRSWSYD SLKNFRQISP AVQNHLKRVY LTLCCALVAS AFGAYLHVLW NIGGILTTIG CIGTMIWLLS CPPYEHQKRL SLLFVSAVLE
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN
Arabidopsis Description
BI-1Bax inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD45]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.