Factsheet for GSMUA_Achr6P36970_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
nucleus 1
mitochondrion 1
endoplasmic reticulum 2
golgi 2
extracellular 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...	endoplasmic reticulum
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P04070_001
GSMUA_Achr1P10520_001
GSMUA_Achr2P13570_001
GSMUA_Achr3P10540_001	endoplasmic reticulum
GSMUA_Achr3P10550_001	endoplasmic reticulum
GSMUA_Achr3P19410_001
GSMUA_Achr4P27140_001
GSMUA_Achr4P29530_001	endoplasmic reticulum
GSMUA_Achr4P30410_001
GSMUA_Achr6P06700_001
GSMUA_Achr7P19560_001
GSMUA_Achr9P23040_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...	endoplasmic reticulum

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47120.1	GSMUA_Achr2P13570_001	AT1G26340.1	19054355
AT5G47120.1	GSMUA_Achr11P...	AT1G78900.1	23782494
AT5G47120.1	GSMUA_Achr1P10520_001	AT1G78900.1	23782494
AT5G47120.1	GSMUA_Achr9P23040_001	AT1G78900.1	23782494
AT5G47120.1	GSMUA_Achr7P19560_001	AT2G18960.1	23782494
AT5G47120.1	GSMUA_Achr3P19410_001	AT2G32720.1	19054355
AT5G47120.1	GSMUA_Achr6P06700_001	AT2G32720.1	19054355
AT5G47120.1	GSMUA_AchrUn_...	AT2G32720.1	19054355
AT5G47120.1	GSMUA_Achr3P10540_001	AT4G13770.1	23782494
AT5G47120.1	GSMUA_Achr3P10550_001	AT4G13770.1	23782494
AT5G47120.1	GSMUA_AchrUn_...	AT4G13770.1	23782494
AT5G47120.1	GSMUA_Achr3P10540_001	AT4G13770.1	23782494
AT5G47120.1	GSMUA_Achr3P10550_001	AT4G13770.1	23782494
AT5G47120.1	GSMUA_AchrUn_...	AT4G13770.1	23782494
AT5G47120.1	GSMUA_Achr10P...	AT4G21150.1	23782494
AT5G47120.1	GSMUA_Achr4P29530_001	AT4G21150.1	23782494
AT5G47120.1	GSMUA_Achr10P...	AT4G21150.1	23782494
AT5G47120.1	GSMUA_Achr4P29530_001	AT4G21150.1	23782494
AT5G47120.1	GSMUA_Achr3P19410_001	AT5G48810.1	19054355
AT5G47120.1	GSMUA_Achr6P06700_001	AT5G48810.1	19054355
AT5G47120.1	GSMUA_AchrUn_...	AT5G48810.1	19054355
AT5G47120.1	GSMUA_Achr11P...	AT5G53560.1	19054355
AT5G47120.1	GSMUA_Achr1P04070_001	AT5G53560.1	19054355
AT5G47120.1	GSMUA_Achr4P27140_001	AT5G53560.1	19054355
AT5G47120.1	GSMUA_Achr4P30410_001	AT5G53560.1	19054355

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P07470_001	Banana	plasma membrane	75.9	78.42
PGSC0003DMT400067509	Potato	plasma membrane	68.27	68.55
AT5G47120.1	Thale cress	plasma membrane	67.47	68.02
CDY43441	Canola	plasma membrane	67.47	68.02
CDY28973	Canola	plasma membrane	67.47	68.02
CDY25984	Canola	plasma membrane	67.47	68.02
Bra022106.1-P	Field mustard	plasma membrane	67.47	68.02
Bra017502.1-P	Field mustard	plasma membrane	67.47	68.02
Solyc08g077980.2.1	Tomato	plasma membrane	67.87	67.87
CDY40569	Canola	plasma membrane	67.07	67.61
KRH77301	Soybean	plasma membrane	65.06	66.39
CDY33515	Canola	endoplasmic reticulum, golgi	25.3	66.32
VIT_00s1665g00010.t01	Wine grape	golgi, plasma membrane, vacuole	57.03	65.74
Bra024963.1-P	Field mustard	endoplasmic reticulum, golgi	24.5	64.21
KRH57502	Soybean	plasma membrane	63.05	63.56
KRH04210	Soybean	plasma membrane	59.04	59.76
KRH28186	Soybean	peroxisome	64.66	58.76
AT5G47130.2	Thale cress	endoplasmic reticulum, extracellular, golgi	43.78	48.23
AT4G17580.1	Thale cress	plasma membrane	47.39	47.77
KRH24687	Soybean	extracellular	19.28	40.68
Solyc01g090000.1.1	Tomato	plasma membrane	24.5	25.42

Protein Annotations

EnsemblPlants:GSMUA_Achr6P36970_001	EnsemblPlants:GSMUA_Achr6T36970_001	EnsemblPlantsGene:GSMUA_Achr6G36970_001	GO:GO:0005575	GO:GO:0008150	GO:GO:0008219
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0043066	InterPro:Bax_inhbtr1_CS	InterPro:Bax_inhibitor_1-related
PANTHER:PTHR23291	PANTHER:PTHR23291:SF76	PFAM:PF01027	ScanProsite:PS01243	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002967739	UniProt:M0TDD7	MapMan:27.2.6	:	:	:

Description

Bax inhibitor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G36970_001]

Coordinates

chr6:-:34858018..34862346

Molecular Weight (calculated)

27256.7 Da

IEP (calculated)

8.228

GRAVY (calculated)

0.596

Length

249 amino acids

Sequence
(BLAST)

001: MDSFFQSRSQ PSFGSSWSYN SLKNLRHIQP TVQNHLKLVF LTLCCALAAS AVGAYLHILM NIGGVITMLG CLVSIVCLLS TPPHEERKRF GLLMAASVLE
101: GASVGPLIEL AIDFDPSVLV TAFVGTAIAF GCFSGAAIVA RRAEFLYLGG LLSSGVSILL WLQLAGSIFG HSVEILKVEL YFGLLIFLGY IVFDTQEIIE
201: RAHLGELDYV KHALHLFTDF VAVFVRILSI MLKNASAKSE DEKKRKKRS

Best Arabidopsis Sequence Match ( AT5G47120.1 )
(BLAST)

001: MDAFSSFFDS QPGSRSWSYD SLKNFRQISP AVQNHLKRVY LTLCCALVAS AFGAYLHVLW NIGGILTTIG CIGTMIWLLS CPPYEHQKRL SLLFVSAVLE
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN

Arabidopsis Description

BI-1Bax inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD45]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.