CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
nucleus 1
peroxisome 1
plasma membrane 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	golgi, plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95690	endoplasmic reticulum
KRG97223
KRG99574
KRH05914	endoplasmic reticulum
KRH06410
KRH16408
KRH32199	endoplasmic reticulum
KRH44667
KRH46991
KRH47845
KRH53553
KRH53581
KRH64355
KRH66053
KRH67412	endoplasmic reticulum
KRH68944

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47120.1	KRH53553	AT1G26340.1	19054355
AT5G47120.1	KRH44667	AT1G78900.1	23782494
AT5G47120.1	KRH46991	AT1G78900.1	23782494
AT5G47120.1	KRH16408	AT2G18960.1	23782494
AT5G47120.1	KRG97223	AT2G46650.1	19054355
AT5G47120.1	KRH06410	AT2G46650.1	19054355
AT5G47120.1	KRH47845	AT2G46650.1	19054355
AT5G47120.1	KRH68944	AT2G46650.1	19054355
AT5G47120.1	KRH05914	AT4G13770.1	23782494
AT5G47120.1	KRH05914	AT4G13770.1	23782494
AT5G47120.1	KRG95690	AT4G21150.1	23782494
AT5G47120.1	KRH32199	AT4G21150.1	23782494
AT5G47120.1	KRH67412	AT4G21150.1	23782494
AT5G47120.1	KRG95690	AT4G21150.1	23782494
AT5G47120.1	KRH32199	AT4G21150.1	23782494
AT5G47120.1	KRH67412	AT4G21150.1	23782494
AT5G47120.1	KRG99574	AT5G48810.1	19054355
AT5G47120.1	KRH66053	AT5G48810.1	19054355
AT5G47120.1	KRH53581	AT5G53560.1	19054355
AT5G47120.1	KRH64355	AT5G53560.1	19054355

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28186	Soybean	peroxisome	96.72	86.13
KRH57502	Soybean	plasma membrane	82.38	81.38
KRH04210	Soybean	plasma membrane	77.05	76.42
VIT_00s1665g00010.t01	Wine grape	golgi, plasma membrane, vacuole	66.39	75.0
PGSC0003DMT400067509	Potato	plasma membrane	76.23	75.0
Solyc08g077980.2.1	Tomato	plasma membrane	76.23	74.7
CDY33515	Canola	endoplasmic reticulum, golgi	28.28	72.63
Bra024963.1-P	Field mustard	endoplasmic reticulum, golgi	27.87	71.58
AT5G47120.1	Thale cress	plasma membrane	71.31	70.45
CDY25984	Canola	plasma membrane	71.31	70.45
CDY43441	Canola	plasma membrane	70.9	70.04
Bra017502.1-P	Field mustard	plasma membrane	70.9	70.04
Bra022106.1-P	Field mustard	plasma membrane	70.49	69.64
CDY40569	Canola	plasma membrane	70.08	69.23
CDY28973	Canola	plasma membrane	70.08	69.23
GSMUA_Achr7P07470_001	Banana	plasma membrane	66.8	67.63
Os02t0125300-01	Rice	plasma membrane	67.62	66.27
GSMUA_Achr6P36970_001	Banana	plasma membrane	66.39	65.06
TraesCS6D01G077000.1	Wheat	plasma membrane	65.16	64.37
TraesCS6B01G113900.1	Wheat	plasma membrane	65.16	64.37
TraesCS6A01G083200.1	Wheat	peroxisome, plasma membrane, plastid, vacuole	64.75	63.97
EES04425	Sorghum	plastid	67.21	63.57
Zm00001d053952_P001	Maize	plasma membrane	66.39	62.55
Zm00001d045618_P001	Maize	plasma membrane	62.7	61.2
EER89024	Sorghum	plasma membrane	61.89	60.16
KRH24687	Soybean	extracellular	25.0	51.69
HORVU6Hr1G014450.1	Barley	nucleus	65.16	50.8
Zm00001d015091_P003	Maize	mitochondrion, nucleus, peroxisome, plasma membrane	66.39	49.09
AT4G17580.1	Thale cress	plasma membrane	49.18	48.58
AT5G47130.2	Thale cress	endoplasmic reticulum, extracellular, golgi	43.44	46.9
TraesCS1D01G018500.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	49.18	41.52

Protein Annotations

EMBL:ACUP02000669	EMBL:BT094926	EnsemblPlants:KRH77301	EnsemblPlantsGene:GLYMA_01G205200	EntrezGene:100804444	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:Bax_inhibitor_1-related	PANTHER:PTHR23291	PANTHER:PTHR23291:SF76	PFAM:PF01027
ProteinID:KRH77301	ProteinID:KRH77301.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0001B15C6F	UniProt:C6TBL5
MapMan:27.2.6	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:53778470..53780688

Molecular Weight (calculated)

27112.2 Da

IEP (calculated)

9.079

GRAVY (calculated)

0.537

Length

244 amino acids

Sequence
(BLAST)

001: MDSFNSFFDS TNRWNYDTLK NFRQISPVVQ NHLKQVYFTL CFAVVAAAVG AYLHVLLNIG GFLTTVACVG SSVWLLSTPP FEERKRVTLL MAASLFQGAS
101: IGPLIDLAIQ IDPSLIFSAF VGTSLAFACF SGAALVARRR EYLYLGGLVS SGLSILLWLH FASSIFGGST ALFKFELYFG LLVFVGYIVV DTQEIVERAH
201: LGDLDYVKHA LTLFTDLVAV FVRILVIMLK NSAERNEKKK KRRD

Best Arabidopsis Sequence Match ( AT5G47120.1 )
(BLAST)

001: MDAFSSFFDS QPGSRSWSYD SLKNFRQISP AVQNHLKRVY LTLCCALVAS AFGAYLHVLW NIGGILTTIG CIGTMIWLLS CPPYEHQKRL SLLFVSAVLE
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN

Arabidopsis Description

BI-1Bax inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD45]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.