Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s1665g00010.t01 | Wine grape | golgi, plasma membrane, vacuole | 50.85 | 27.78 |
| KRH57502 | Soybean | plasma membrane | 55.93 | 26.72 |
| KRH77301 | Soybean | plasma membrane | 51.69 | 25.0 |
| KRH04210 | Soybean | plasma membrane | 51.69 | 24.8 |
| KRH28186 | Soybean | peroxisome | 50.85 | 21.9 |
| GSMUA_Achr7P07470_001 | Banana | plasma membrane | 43.22 | 21.16 |
| TraesCS6D01G077000.1 | Wheat | plasma membrane | 43.22 | 20.65 |
| TraesCS6B01G113900.1 | Wheat | plasma membrane | 43.22 | 20.65 |
| CDY28973 | Canola | plasma membrane | 43.22 | 20.65 |
| TraesCS6A01G083200.1 | Wheat | peroxisome, plasma membrane, plastid, vacuole | 43.22 | 20.65 |
| PGSC0003DMT400067509 | Potato | plasma membrane | 43.22 | 20.56 |
| Solyc08g077980.2.1 | Tomato | plasma membrane | 43.22 | 20.48 |
| AT5G47120.1 | Thale cress | plasma membrane | 42.37 | 20.24 |
| Bra022106.1-P | Field mustard | plasma membrane | 42.37 | 20.24 |
| EES04425 | Sorghum | plastid | 44.07 | 20.16 |
| Os02t0125300-01 | Rice | plasma membrane | 42.37 | 20.08 |
| Zm00001d045618_P001 | Maize | plasma membrane | 42.37 | 20.0 |
| CDY40569 | Canola | plasma membrane | 41.53 | 19.84 |
| Zm00001d053952_P001 | Maize | plasma membrane | 43.22 | 19.69 |
| EER89024 | Sorghum | plasma membrane | 41.53 | 19.52 |
| CDY25984 | Canola | plasma membrane | 40.68 | 19.43 |
| GSMUA_Achr6P36970_001 | Banana | plasma membrane | 40.68 | 19.28 |
| CDY43441 | Canola | plasma membrane | 39.83 | 19.03 |
| Bra017502.1-P | Field mustard | plasma membrane | 39.83 | 19.03 |
| HORVU6Hr1G014450.1 | Barley | nucleus | 43.22 | 16.29 |
| AT5G47130.2 | Thale cress | endoplasmic reticulum, extracellular, golgi | 28.81 | 15.04 |
| Zm00001d015091_P003 | Maize | mitochondrion, nucleus, peroxisome, plasma membrane | 41.53 | 14.85 |
| AT4G17580.1 | Thale cress | plasma membrane | 30.51 | 14.57 |
| TraesCS1D01G018500.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 35.59 | 14.53 |
| CDY33515 | Canola | endoplasmic reticulum, golgi | 7.63 | 9.47 |
| Bra024963.1-P | Field mustard | endoplasmic reticulum, golgi | 7.63 | 9.47 |
Protein Annotations
| EMBL:ACUP02007182 | EnsemblPlants:KRH24687 | EnsemblPlantsGene:GLYMA_12G056200 | InterPro:Bax_inhibitor_1-related | PANTHER:PTHR23291 | PANTHER:PTHR23291:SF76 |
| ProteinID:KRH24687 | ProteinID:KRH24687.1 | SEG:seg | UniParc:UPI0006EDD214 | UniProt:A0A0R0HED2 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr12:-:4093271..4093659
Molecular Weight (calculated)
13571.0 Da
IEP (calculated)
7.346
GRAVY (calculated)
0.755
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSESLFMFC GTLGVFSLRW LPLEKWFGCY LSTPLFEEQK RLCLLMALAL FQGASIRPLI DLAIAIDPSL IVSTFVWQLL WLLHREYLHL GGLLSSRLSI
101: LMWLPFASSP FWGFNNTI
101: LMWLPFASSP FWGFNNTI
001: MDAFSSFFDS QPGSRSWSYD SLKNFRQISP AVQNHLKRVY LTLCCALVAS AFGAYLHVLW NIGGILTTIG CIGTMIWLLS CPPYEHQKRL SLLFVSAVLE
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN
Arabidopsis Description
BI-1Bax inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD45]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.