Factsheet for Zm00001d053952_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d012086_P004	endoplasmic reticulum
Zm00001d013197_P002
Zm00001d013257_P002
Zm00001d013839_P001
Zm00001d015426_P001
Zm00001d015427_P001
Zm00001d017425_P001
Zm00001d027407_P003
Zm00001d027603_P001
Zm00001d032442_P002
Zm00001d033487_P001
Zm00001d034048_P003
Zm00001d035685_P001
Zm00001d042398_P001	endoplasmic reticulum
Zm00001d045237_P004
Zm00001d053765_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47120.1	Zm00001d013257_P002	AT1G26340.1	19054355
AT5G47120.1	Zm00001d034048_P003	AT1G26340.1	19054355
AT5G47120.1	Zm00001d015426_P001	AT1G78900.1	23782494
AT5G47120.1	Zm00001d015427_P001	AT1G78900.1	23782494
AT5G47120.1	Zm00001d053765_P003	AT1G78900.1	23782494
AT5G47120.1	Zm00001d013197_P002	AT2G18960.1	23782494
AT5G47120.1	Zm00001d027407_P003	AT2G18960.1	23782494
AT5G47120.1	Zm00001d027603_P001	AT2G18960.1	23782494
AT5G47120.1	Zm00001d033487_P001	AT2G18960.1	23782494
AT5G47120.1	Zm00001d045237_P004	AT2G18960.1	23782494
AT5G47120.1	Zm00001d017425_P001	AT2G46650.1	19054355
AT5G47120.1	Zm00001d012086_P004	AT4G21150.1	23782494
AT5G47120.1	Zm00001d042398_P001	AT4G21150.1	23782494
AT5G47120.1	Zm00001d012086_P004	AT4G21150.1	23782494
AT5G47120.1	Zm00001d042398_P001	AT4G21150.1	23782494
AT5G47120.1	Zm00001d035685_P001	AT5G48810.1	19054355
AT5G47120.1	Zm00001d013839_P001	AT5G53560.1	19054355
AT5G47120.1	Zm00001d032442_P002	AT5G53560.1	19054355

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04425	Sorghum	plastid	91.51	91.86
TraesCS6D01G077000.1	Wheat	plasma membrane	80.31	84.21
TraesCS6B01G113900.1	Wheat	plasma membrane	80.31	84.21
Os02t0125300-01	Rice	plasma membrane	80.69	83.94
TraesCS6A01G083200.1	Wheat	peroxisome, plasma membrane, plastid, vacuole	79.92	83.81
GSMUA_Achr7P07470_001	Banana	plasma membrane	69.88	75.1
CDY33515	Canola	endoplasmic reticulum, golgi	25.87	70.53
Bra022106.1-P	Field mustard	plasma membrane	67.18	70.45
AT5G47120.1	Thale cress	plasma membrane	66.8	70.04
CDY28973	Canola	plasma membrane	66.8	70.04
CDY40569	Canola	plasma membrane	66.41	69.64
Bra024963.1-P	Field mustard	endoplasmic reticulum, golgi	25.48	69.47
Bra017502.1-P	Field mustard	plasma membrane	66.02	69.23
CDY25984	Canola	plasma membrane	66.02	69.23
CDY43441	Canola	plasma membrane	66.02	69.23
Zm00001d045618_P001	Maize	plasma membrane	65.25	67.6
VIT_00s1665g00010.t01	Wine grape	golgi, plasma membrane, vacuole	56.37	67.59
KRH77301	Soybean	plasma membrane	62.55	66.39
HORVU6Hr1G014450.1	Barley	nucleus	79.92	66.13
PGSC0003DMT400067509	Potato	plasma membrane	62.93	65.73
Solyc08g077980.2.1	Tomato	plasma membrane	62.93	65.46
Zm00001d015091_P003	Maize	mitochondrion, nucleus, peroxisome, plasma membrane	80.69	63.33
KRH57502	Soybean	plasma membrane	59.85	62.75
KRH04210	Soybean	plasma membrane	57.14	60.16
KRH28186	Soybean	peroxisome	61.78	58.39
AT4G17580.1	Thale cress	plasma membrane	49.42	51.82
AT5G47130.2	Thale cress	endoplasmic reticulum, extracellular, golgi	42.08	48.23
KRH24687	Soybean	extracellular	19.69	43.22
Solyc01g090000.1.1	Tomato	plasma membrane	25.87	27.92

Protein Annotations

EMBL:BT054967	EnsemblPlants:Zm00001d053952_P001	EnsemblPlants:Zm00001d053952_T001	EnsemblPlantsGene:Zm00001d053952	EntrezGene:100279826	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:Bax_inhibitor_1-related	PANTHER:PTHR23291	PANTHER:PTHR23291:SF76	PFAM:PF01027
ProteinID:AQK60839.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00019173E7	UniProt:B8A075	MapMan:27.2.6

Description

Bax inhibitor 1

Coordinates

chr4:+:244166895..244169117

Molecular Weight (calculated)

28434.8 Da

IEP (calculated)

8.554

GRAVY (calculated)

0.472

Length

259 amino acids

Sequence
(BLAST)

001: MDAFYSTTAS STSSAPYGGY GGGGEGWGYD SMKNFRQISP AVQTHLKLVY LTLCVALASS AVGAYLHVVW NIGGMLTMLG CVGSIAWLFS VPVYEERKRY
101: GLLMAAALLE GASVGPLIKL AVEFDPSILV TAFVGTAIAF ACFSCAAVVA KRREYLYLGG LLSSGLSILL WLQFAASIFG QSTSSFMFEV YFGLLIFLGY
201: MVYDTQEVIE RAHHGDMDYI KHALTLFTDF VAVLVRILVI MLKNAADKSE DKRRKRRRW

Best Arabidopsis Sequence Match ( AT5G47120.1 )
(BLAST)

001: MDAFSSFFDS QPGSRSWSYD SLKNFRQISP AVQNHLKRVY LTLCCALVAS AFGAYLHVLW NIGGILTTIG CIGTMIWLLS CPPYEHQKRL SLLFVSAVLE
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN

Arabidopsis Description

BI-1Bax inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD45]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.