CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
nucleus 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90164
EER91363
EER93435
EES02143
EES04615
EES11577
EES17559
OQU85747
OQU88089	endoplasmic reticulum

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47120.1	EER93435	AT1G26340.1	19054355
AT5G47120.1	EER90164	AT1G78900.1	23782494
AT5G47120.1	EES04615	AT1G78900.1	23782494
AT5G47120.1	EES11577	AT2G18960.1	23782494
AT5G47120.1	EES02143	AT2G32720.1	19054355
AT5G47120.1	EES17559	AT2G32720.1	19054355
AT5G47120.1	OQU85747	AT2G46650.1	19054355
AT5G47120.1	OQU88089	AT4G21150.1	23782494
AT5G47120.1	OQU88089	AT4G21150.1	23782494
AT5G47120.1	EES02143	AT5G48810.1	19054355
AT5G47120.1	EES17559	AT5G48810.1	19054355
AT5G47120.1	EER91363	AT5G53560.1	19054355

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045618_P001	Maize	plasma membrane	88.84	89.2
GSMUA_Achr7P07470_001	Banana	plasma membrane	68.13	70.95
EES04425	Sorghum	plastid	70.92	68.99
CDY33515	Canola	endoplasmic reticulum, golgi	24.7	65.26
Bra024963.1-P	Field mustard	endoplasmic reticulum, golgi	24.3	64.21
VIT_00s1665g00010.t01	Wine grape	golgi, plasma membrane, vacuole	54.98	63.89
Solyc08g077980.2.1	Tomato	plasma membrane	63.35	63.86
PGSC0003DMT400067509	Potato	plasma membrane	62.95	63.71
Bra017502.1-P	Field mustard	plasma membrane	62.55	63.56
CDY43441	Canola	plasma membrane	62.55	63.56
AT5G47120.1	Thale cress	plasma membrane	62.15	63.16
CDY25984	Canola	plasma membrane	62.15	63.16
CDY28973	Canola	plasma membrane	61.75	62.75
Bra022106.1-P	Field mustard	plasma membrane	61.75	62.75
CDY40569	Canola	plasma membrane	60.96	61.94
KRH77301	Soybean	plasma membrane	60.16	61.89
KRH57502	Soybean	plasma membrane	55.78	56.68
KRH28186	Soybean	peroxisome	60.16	55.11
KRH04210	Soybean	plasma membrane	51.39	52.44
AT5G47130.2	Thale cress	endoplasmic reticulum, extracellular, golgi	43.03	47.79
AT4G17580.1	Thale cress	plasma membrane	46.22	46.96
TraesCS1D01G018500.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	51.79	44.98
KRH24687	Soybean	extracellular	19.52	41.53
Solyc01g090000.1.1	Tomato	plasma membrane	22.31	23.33

Protein Annotations

EnsemblPlants:EER89024	EnsemblPlantsGene:SORBI_3010G000300	EntrezGene:8066404	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Bax_inhibitor_1-related	PANTHER:PTHR23291	PANTHER:PTHR23291:SF76	PFAM:PF01027	ProteinID:EER89024	ProteinID:EER89024.1
RefSeq:XP_002437657.1	SEG:seg	TMHMM:TMhelix	unigene:Sbi.1407	UniParc:UPI000189DA0E	UniProt:C5Z214
MapMan:27.2.6	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:18902..20302

Molecular Weight (calculated)

27531.9 Da

IEP (calculated)

8.784

GRAVY (calculated)

0.425

Length

251 amino acids

Sequence
(BLAST)

001: MEGFWDAQSQ RRRTGGGGGF ESLKRLGHIS PAVQSHLKHV YLTLCSALVF SALGAYLHIL LNVGGTLTTV GCLAAIAYLI SLPASRDQER NRFALLMSAA
101: LLQGASVGPL VDLVIDFDPR ILATAFVGTA IAFGCFSGAA IIANRREYLY LGGLLSSGLS ILLWLQFATS IFGHTSTTFM IELYFGLLVF LGYMVFDTQE
201: IIERAHGGDM DYIKHALTLF TDFVAVLVRI LVIMMKNAQE KSEDEKKRKK R

Best Arabidopsis Sequence Match ( AT5G47120.1 )
(BLAST)

001: MDAFSSFFDS QPGSRSWSYD SLKNFRQISP AVQNHLKRVY LTLCCALVAS AFGAYLHVLW NIGGILTTIG CIGTMIWLLS CPPYEHQKRL SLLFVSAVLE
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN

Arabidopsis Description

BI-1Bax inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD45]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.