CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX79577	cytosol, nucleus
CDX84282	cytosol, nucleus
CDX84628	cytosol, nucleus
CDY15865	cytosol, nucleus
CDY25984	cytosol
CDY28973	cytosol
CDY31640	cytosol, nucleus
CDY40569	cytosol
CDY43441	cytosol
CDY43655	cytosol, nucleus
CDY43657	cytosol, nucleus
CDY46240	cytosol, nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G32720.1	CDX79577	AT2G34770.1	19054355
AT2G32720.1	CDX84282	AT2G34770.1	19054355
AT2G32720.1	CDX84628	AT2G34770.1	19054355
AT2G32720.1	CDY15865	AT2G34770.1	19054355
AT2G32720.1	CDY31640	AT2G34770.1	19054355
AT2G32720.1	CDY43655	AT2G34770.1	19054355
AT2G32720.1	CDY43657	AT2G34770.1	19054355
AT2G32720.1	CDY46240	AT2G34770.1	19054355
AT2G32720.1	CDX79577	AT2G34770.1	22635113
AT2G32720.1	CDX84282	AT2G34770.1	22635113
AT2G32720.1	CDX84628	AT2G34770.1	22635113
AT2G32720.1	CDY15865	AT2G34770.1	22635113
AT2G32720.1	CDY31640	AT2G34770.1	22635113
AT2G32720.1	CDY43655	AT2G34770.1	22635113
AT2G32720.1	CDY43657	AT2G34770.1	22635113
AT2G32720.1	CDY46240	AT2G34770.1	22635113
AT2G32720.1	CDX79577	AT2G34770.1	22635113
AT2G32720.1	CDX84282	AT2G34770.1	22635113
AT2G32720.1	CDX84628	AT2G34770.1	22635113
AT2G32720.1	CDY15865	AT2G34770.1	22635113
AT2G32720.1	CDY31640	AT2G34770.1	22635113
AT2G32720.1	CDY43655	AT2G34770.1	22635113
AT2G32720.1	CDY43657	AT2G34770.1	22635113
AT2G32720.1	CDY46240	AT2G34770.1	22635113
AT2G32720.1	CDY25984	AT5G47120.1	19054355
AT2G32720.1	CDY28973	AT5G47120.1	19054355
AT2G32720.1	CDY40569	AT5G47120.1	19054355
AT2G32720.1	CDY43441	AT5G47120.1	19054355
AT2G32720.1	CDY25984	AT5G47120.1	19054355
AT2G32720.1	CDY28973	AT5G47120.1	19054355
AT2G32720.1	CDY40569	AT5G47120.1	19054355
AT2G32720.1	CDY43441	AT5G47120.1	19054355

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005564.1-P	Field mustard	cytosol	97.01	97.01
CDX79471	Canola	cytosol	94.03	94.03
AT2G32720.1	Thale cress	cytosol	94.03	94.03
CDX84725	Canola	cytosol	93.28	93.28
CDY19161	Canola	cytosol	93.28	93.28
CDY23792	Canola	cytosol	93.28	93.28
CDY12180	Canola	cytosol	99.25	85.26
GSMUA_Achr3P19410_001	Banana	cytosol	77.61	77.61
EES17559	Sorghum	cytosol	75.37	75.94
Os01t0971500-01	Rice	cytosol, plasma membrane	76.12	75.56
HORVU5Hr1G045040.1	Barley	cytosol, plasma membrane	74.63	74.63
GSMUA_Achr6P06700_001	Banana	cytosol	74.63	74.63
EES02143	Sorghum	cytosol	74.63	74.07
TraesCS5B01G138200.1	Wheat	cytosol, golgi	73.88	73.88
TraesCS5A01G138900.1	Wheat	cytosol, golgi	73.88	73.88
TraesCS5D01G152500.1	Wheat	golgi	73.13	73.13
TraesCS3D01G529500.1	Wheat	cytosol, golgi, unclear	74.63	72.99
Os05t0108800-01	Rice	plasma membrane	74.63	72.99
TraesCS3A01G524000.2	Wheat	cytosol, golgi, plastid	73.88	72.26
CDX85364	Canola	cytosol	67.91	65.94
CDX86279	Canola	cytosol	67.91	65.94
CDY28830	Canola	cytosol	64.93	64.93
CDX96233	Canola	cytosol	64.93	64.93
CDY19937	Canola	cytosol	66.42	63.57
CDY00045	Canola	cytosol	66.42	63.57
CDY47080	Canola	cytosol	58.96	58.96
HORVU3Hr1G114360.3	Barley	plasma membrane	75.37	58.38
CDY14370	Canola	cytosol	64.93	55.77
CDY27310	Canola	cytosol	45.52	45.52
CDY61721	Canola	cytosol	45.52	45.52
CDY20247	Canola	mitochondrion	64.18	45.26
CDX80035	Canola	cytosol	44.78	44.78
CDY47078	Canola	nucleus	38.81	44.07
CDY41545	Canola	cytosol	44.03	44.03
Solyc12g098320.1.1	Tomato	cytosol	23.13	43.66
CDY16153	Canola	cytosol	41.79	41.48
CDX85016	Canola	cytosol	41.79	41.48
PGSC0003DMT400019916	Potato	cytosol	43.28	40.85
GSMUA_AchrUn_...	Banana	mitochondrion	70.9	38.78
CDY24550	Canola	extracellular, golgi, vacuole	24.63	27.27
CDY34133	Canola	endoplasmic reticulum, extracellular, golgi	24.63	27.05
CDY46984	Canola	endoplasmic reticulum	26.12	26.52
CDY61511	Canola	endoplasmic reticulum, golgi	15.67	25.0
CDY44610	Canola	endoplasmic reticulum	15.67	25.0

Protein Annotations

MapMan:21.9.1.7.1.3	Gene3D:3.10.120.10	GO:A0A078J5R0	UniProt:A0A078J5R0	EnsemblPlants:CDY59638	ProteinID:CDY59638
ProteinID:CDY59638.1	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0020037	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00027512001
InterPro:IPR001199	InterPro:IPR036400	PFAM:PF00173	PRINTS:PR00363	ScanProsite:PS00191	PFscan:PS50255
PANTHER:PTHR19359	PANTHER:PTHR19359:SF69	SMART:SM01117	SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI0004EDC0D1
SEG:seg	:	:	:	:	:

Description

BnaAnng16110DBnaAnng16110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5R0]

Coordinates

chrLK033791:+:3092..4745

Molecular Weight (calculated)

14985.8 Da

IEP (calculated)

5.191

GRAVY (calculated)

-0.374

Length

134 amino acids

Sequence
(BLAST)

001: MGDKAKIFTL SQVSEHNQAH DCWIVINGKV YDVTKFLEDH PGGDEVLLSS TGKDATDDFE DVGHSESARE MMEQYCVGEI DPTTIPKKTK YTPPKQPHYN
101: QDKTSEFIIK ILQFLVPLAI LGLAVGIRIY TKSA

Best Arabidopsis Sequence Match ( AT2G32720.1 )
(BLAST)

001: MGDEAKIFTL SEVSEHNQAH DCWIVINGKV YNVTKFLEDH PGGDDVLLSS TGKDATDDFE DVGHSESARE MMEQYYVGEI DPTTIPKKVK YTPPKQPHYN
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG

Arabidopsis Description

CYTB5-BCYTB5-D [Source:UniProtKB/TrEMBL;Acc:A0A178VXM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.