Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24550 | Canola | extracellular, golgi, vacuole | 97.54 | 98.35 |
| CDY61511 | Canola | endoplasmic reticulum, golgi | 63.11 | 91.67 |
| CDY44610 | Canola | endoplasmic reticulum | 61.48 | 89.29 |
| AT1G60660.1 | Thale cress | endoplasmic reticulum | 84.43 | 85.12 |
| CDY46984 | Canola | endoplasmic reticulum | 85.25 | 78.79 |
| Solyc12g008470.1.1 | Tomato | mitochondrion | 53.28 | 77.38 |
| VIT_09s0002g03420.t01 | Wine grape | cytosol | 52.46 | 65.31 |
| KRH74256 | Soybean | endoplasmic reticulum, golgi | 62.3 | 63.87 |
| Os09t0334600-00 | Rice | mitochondrion | 45.9 | 63.64 |
| TraesCS5D01G190900.1 | Wheat | endoplasmic reticulum, extracellular | 57.38 | 59.32 |
| TraesCS5B01G183900.1 | Wheat | endoplasmic reticulum, extracellular | 57.38 | 59.32 |
| TraesCS5A01G185800.1 | Wheat | endoplasmic reticulum, extracellular | 57.38 | 59.32 |
| HORVU5Hr1G056140.2 | Barley | endoplasmic reticulum, extracellular | 55.74 | 57.63 |
| EER98759 | Sorghum | endoplasmic reticulum, extracellular | 55.74 | 57.63 |
| OQU80382 | Sorghum | extracellular, vacuole | 54.1 | 55.93 |
| Zm00001d032266_P001 | Maize | endoplasmic reticulum, extracellular | 52.46 | 54.24 |
| Os08t0386300-02 | Rice | endoplasmic reticulum, extracellular | 51.64 | 52.94 |
| KRH07276 | Soybean | endoplasmic reticulum, plasma membrane | 61.48 | 49.02 |
| GSMUA_Achr9P05320_001 | Banana | endoplasmic reticulum, plasma membrane | 54.1 | 45.21 |
| CDX85016 | Canola | cytosol | 32.79 | 29.63 |
| CDY16153 | Canola | cytosol | 32.79 | 29.63 |
| CDY47078 | Canola | nucleus | 25.41 | 26.27 |
| CDX79471 | Canola | cytosol | 27.87 | 25.37 |
| CDY23792 | Canola | cytosol | 27.87 | 25.37 |
| CDX96233 | Canola | cytosol | 27.87 | 25.37 |
| CDY19161 | Canola | cytosol | 27.87 | 25.37 |
| CDY28830 | Canola | cytosol | 27.87 | 25.37 |
| CDY59638 | Canola | cytosol | 27.05 | 24.63 |
| CDY47080 | Canola | cytosol | 27.05 | 24.63 |
| CDX84725 | Canola | cytosol | 27.05 | 24.63 |
| CDY14370 | Canola | cytosol | 28.69 | 22.44 |
| CDY61721 | Canola | cytosol | 24.59 | 22.39 |
| CDY27310 | Canola | cytosol | 24.59 | 22.39 |
| CDY19937 | Canola | cytosol | 24.59 | 21.43 |
| CDY00045 | Canola | cytosol | 24.59 | 21.43 |
| CDY12180 | Canola | cytosol | 27.05 | 21.15 |
| CDX86279 | Canola | cytosol | 23.77 | 21.01 |
| CDX85364 | Canola | cytosol | 23.77 | 21.01 |
| CDY41545 | Canola | cytosol | 22.13 | 20.15 |
| CDX80035 | Canola | cytosol | 21.31 | 19.4 |
| CDY20247 | Canola | mitochondrion | 29.51 | 18.95 |
Protein Annotations
| Gene3D:3.10.120.10 | MapMan:35.1 | GO:A0A078HBF0 | UniProt:A0A078HBF0 | EnsemblPlants:CDY34133 | ProteinID:CDY34133 |
| ProteinID:CDY34133.1 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0020037 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00056091001 | InterPro:IPR001199 | InterPro:IPR036400 | PFAM:PF00173 |
| PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF65 | SMART:SM01117 |
| SUPFAM:SSF55856 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EE0865 | SEG:seg | : |
Description
BnaC01g28730DBnaC01g28730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBF0]
Coordinates
chrLK032329:-:261218..261831
Molecular Weight (calculated)
13665.0 Da
IEP (calculated)
4.938
GRAVY (calculated)
-0.598
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MIAVIGLLLG FLVSALFLIQ GKRRSSNGGQ EKKQQSSNDD PKDSKPKSYS KSEVAEHNKR DDCWIIIKDK VYDVTSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGQL RE
101: GPQHATRVFD MIEDFYIGQL RE
001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H
101: GPQHATRVFD MIEDFYIGEL H
Arabidopsis Description
CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.