CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G185800.1	Wheat	endoplasmic reticulum, extracellular	80.51	80.51
TraesCS5B01G183900.1	Wheat	endoplasmic reticulum, extracellular	80.51	80.51
TraesCS5D01G190900.1	Wheat	endoplasmic reticulum, extracellular	80.51	80.51
HORVU5Hr1G056140.2	Barley	endoplasmic reticulum, extracellular	79.66	79.66
Os09t0334600-00	Rice	mitochondrion	59.32	79.55
OQU80382	Sorghum	extracellular, vacuole	75.42	75.42
Solyc12g008470.1.1	Tomato	mitochondrion	48.31	67.86
VIT_09s0002g03420.t01	Wine grape	cytosol	53.39	64.29
KRH74256	Soybean	endoplasmic reticulum, golgi	59.32	58.82
CDY24550	Canola	extracellular, golgi, vacuole	57.63	56.2
CDY34133	Canola	endoplasmic reticulum, extracellular, golgi	57.63	55.74
GSMUA_Achr9P05320_001	Banana	endoplasmic reticulum, plasma membrane	68.64	55.48
Bra031489.1-P	Field mustard	extracellular, golgi, vacuole	55.93	54.55
AT1G60660.1	Thale cress	endoplasmic reticulum	55.08	53.72
CDY46984	Canola	endoplasmic reticulum	56.78	50.76
KRH07276	Soybean	endoplasmic reticulum, plasma membrane	61.02	47.06
CDY61511	Canola	endoplasmic reticulum, golgi	31.36	44.05
CDY44610	Canola	endoplasmic reticulum	30.51	42.86
Bra027144.1-P	Field mustard	nucleus	45.76	26.87
EER91363	Sorghum	cytosol	27.97	24.63
EER93435	Sorghum	cytosol	27.12	24.06
EES17559	Sorghum	cytosol	25.42	22.56
EES15848	Sorghum	cytosol	27.12	21.77
EES02143	Sorghum	cytosol	24.58	21.48
OQU85747	Sorghum	mitochondrion	27.97	15.42

Protein Annotations

Gene3D:3.10.120.10	MapMan:35.1	EntrezGene:8055532	UniProt:C5XAG1	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf
InterPro:Cyt_B5_heme-BS	EnsemblPlants:EER98759	ProteinID:EER98759	ProteinID:EER98759.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0020037	GO:GO:0046872	InterPro:IPR001199	InterPro:IPR036400	PFAM:PF00173	PRINTS:PR00363
ScanProsite:PS00191	PFscan:PS50255	PANTHER:PTHR19359	PANTHER:PTHR19359:SF63	SMART:SM01117	EnsemblPlantsGene:SORBI_3002G174400
SUPFAM:SSF55856	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A83DD6	RefSeq:XP_002462238.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:55191431..55195732

Molecular Weight (calculated)

12955.5 Da

IEP (calculated)

6.092

GRAVY (calculated)

-0.171

Length

118 amino acids

Sequence
(BLAST)

001: MEILIYILLA VLLVLGALFV IPKSNSKGKG NGAHPLGSGK TSRTYTKKEV STHNTRKDCW IIIKDKVYDV TSYVEEHPGG DAILNNAGDD STEGFFGPQH
101: GTRVFDIIED FCIGELKE

Best Arabidopsis Sequence Match ( AT1G60660.1 )
(BLAST)

001: MIAVIGLLLG FLVSALFLIQ GKRRRTNDNQ EKKRSSSEPV EDVVRPKSYS KSEVAVHNKR NDCWIIIKDK VYDITSYVEE HPGGDAILDH AGDDSTDGFF
101: GPQHATRVFD MIEDFYIGEL H

Arabidopsis Description

CB5LPCytochrome B5-like protein [Source:UniProtKB/Swiss-Prot;Acc:O22704]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.