Factsheet for Zm00001d023978_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15848	Sorghum	cytosol	92.37	82.31
Os12t0223300-01	Rice	cytosol, peroxisome, plastid	77.86	68.0
TraesCS7B01G336600.1	Wheat	cytosol	72.52	63.76
TraesCS7A01G437700.1	Wheat	cytosol	70.99	62.42
GSMUA_Achr6P28600_001	Banana	cytosol, golgi, peroxisome	51.91	50.37
HORVU7Hr1G100040.1	Barley	plastid	73.28	47.52
GSMUA_Achr3P16820_001	Banana	cytosol	49.62	47.1
TraesCS7D01G427500.1	Wheat	mitochondrion, plastid	70.99	41.7
Zm00001d041963_P001	Maize	plasma membrane	41.22	40.0
Zm00001d011081_P001	Maize	plasma membrane, plastid	39.69	39.1
Zm00001d011786_P001	Maize	plasma membrane	39.69	38.52
VIT_18s0001g09400.t01	Wine grape	mitochondrion	34.35	30.61
Zm00001d017425_P001	Maize	cytosol	32.06	30.22
Zm00001d034048_P003	Maize	cytosol	32.06	30.0
KRH61382	Soybean	cytosol	29.01	27.34
Zm00001d032442_P002	Maize	cytosol	29.01	27.34
Zm00001d013257_P002	Maize	plastid	31.3	27.33
KRH52065	Soybean	cytosol	28.24	27.01
Zm00001d013839_P001	Maize	plasma membrane	36.64	26.37
PGSC0003DMT400055458	Potato	cytosol	27.48	24.49
Solyc04g078140.2.1	Tomato	cytosol	27.48	24.32
Zm00001d035685_P001	Maize	mitochondrion	28.24	23.87
Zm00001d032266_P001	Maize	endoplasmic reticulum, extracellular	19.08	21.19

Protein Annotations

MapMan:21.9.1.7.1.3	Gene3D:3.10.120.10	UniProt:A0A1D6IX37	ProteinID:AQK40483.1	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf
InterPro:Cyt_B5_heme-BS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0020037	GO:GO:0046872	InterPro:IPR001199	InterPro:IPR036400	PFAM:PF00173	PRINTS:PR00363
ScanProsite:PS00191	PFscan:PS50255	PANTHER:PTHR19359	PANTHER:PTHR19359:SF39	SMART:SM01117	SUPFAM:SSF55856
TMHMM:TMhelix	UniParc:UPI0008440210	EnsemblPlantsGene:Zm00001d023978	EnsemblPlants:Zm00001d023978_P001	EnsemblPlants:Zm00001d023978_T001	SEG:seg

Description

Cytochrome b5 isoform B

Coordinates

chr10:+:33717911..33721015

Molecular Weight (calculated)

14314.8 Da

IEP (calculated)

4.637

GRAVY (calculated)

-0.069

Length

131 amino acids

Sequence
(BLAST)

001: MAGEAKKLFF ASEVYDVTKF LEDHPGGEDV LLHASGTSGD ATEAFEEVGH STSAVSMMDS YLIGSIKDYV RPSASKATDP WSADVLPNSR TMQGNKVTPN
101: PNTFLDFLLP LFVLGLAFAA WYYLTFISKN H

Best Arabidopsis Sequence Match ( AT5G48810.1 )
(BLAST)

001: MGGDGKVFTL SEVSQHSSAK DCWIVIDGKV YDVTKFLDDH PGGDEVILTS TGKDATDDFE DVGHSSTAKA MLDEYYVGDI DTATVPVKAK FVPPTSTKAV
101: ATQDKSSDFV IKLLQFLVPL LILGLAFGIR YYTKTKAPSS

Arabidopsis Description

CYTB5-DCytochrome B5 isoform D [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.