Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- nucleus 1
- mitochondrion 2
- extracellular 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr3P19410_001 | |
| GSMUA_Achr6P06700_001 | |
| GSMUA_AchrUn_... |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G34770.1 | GSMUA_Achr3P19410_001 | AT2G32720.1 | 19054355 |
| AT2G34770.1 | GSMUA_Achr6P06700_001 | AT2G32720.1 | 19054355 |
| AT2G34770.1 | GSMUA_AchrUn_... | AT2G32720.1 | 19054355 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P10760_001 | Banana | cytosol | 34.85 | 30.67 |
| Solyc02g070050.2.1 | Tomato | extracellular | 51.52 | 21.12 |
| GSMUA_Achr8P14090_001 | Banana | cytosol | 60.61 | 16.88 |
| Zm00001d034319_P001 | Maize | cytosol | 59.09 | 16.46 |
| GSMUA_Achr11P... | Banana | cytosol | 57.58 | 16.03 |
| Os12t0628400-01 | Rice | cytosol | 57.58 | 15.97 |
| EER93353 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 56.06 | 15.61 |
| EES16419 | Sorghum | endoplasmic reticulum | 56.06 | 15.61 |
| TraesCS5D01G424200.1 | Wheat | cytosol | 56.06 | 15.61 |
| TraesCS5B01G418800.1 | Wheat | cytosol | 54.55 | 15.19 |
| TraesCS5D01G024600.1 | Wheat | cytosol | 53.03 | 14.77 |
| TraesCS5B01G016700.1 | Wheat | cytosol | 53.03 | 14.71 |
| PGSC0003DMT400054396 | Potato | cytosol | 51.52 | 14.41 |
| KRH36837 | Soybean | endoplasmic reticulum, plasma membrane | 51.52 | 14.41 |
| TraesCS5A01G019200.1 | Wheat | cytosol | 51.52 | 14.35 |
| HORVU0Hr1G009740.7 | Barley | cytosol | 51.52 | 14.35 |
| Zm00001d031149_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 57.58 | 14.23 |
| TraesCS5A01G416500.2 | Wheat | endoplasmic reticulum, plasma membrane | 56.06 | 14.12 |
| CDY43657 | Canola | cytosol, plasma membrane, plastid | 50.0 | 13.92 |
| CDY43655 | Canola | cytosol, plasma membrane, plastid | 50.0 | 13.92 |
| CDX84628 | Canola | cytosol, endoplasmic reticulum, plastid | 48.48 | 13.5 |
| GSMUA_Achr2P10740_001 | Banana | cytosol | 48.48 | 13.5 |
| CDX79577 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 48.48 | 13.5 |
| CDY31640 | Canola | cytosol, golgi, plasma membrane | 43.94 | 13.24 |
| KRH11817 | Soybean | cytosol, golgi, plasma membrane | 51.52 | 13.13 |
| AT2G34770.1 | Thale cress | cytosol | 46.97 | 13.08 |
| KRH58400 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 46.97 | 12.97 |
| KRH42277 | Soybean | endoplasmic reticulum, plasma membrane | 46.97 | 12.97 |
| CDY15865 | Canola | plasma membrane | 46.97 | 12.92 |
| CDY46240 | Canola | plasma membrane | 45.45 | 12.5 |
| Bra005394.1-P | Field mustard | plasma membrane | 43.94 | 12.24 |
| CDX84282 | Canola | cytosol, endoplasmic reticulum, peroxisome | 45.45 | 12.15 |
| VIT_10s0003g05380.t01 | Wine grape | plastid | 51.52 | 11.53 |
| HORVU5Hr1G100890.11 | Barley | plastid | 54.55 | 10.17 |
| PGSC0003DMT400019648 | Potato | plasma membrane | 34.85 | 9.24 |
| Solyc02g022890.1.1 | Tomato | extracellular | 9.09 | 8.7 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P01730_001 | EnsemblPlants:GSMUA_Achr11T01730_001 | EnsemblPlantsGene:GSMUA_Achr11G01730_001 | PANTHER:PTHR12863 | PANTHER:PTHR12863:SF2 | UniParc:UPI000295B13A |
| UniProt:M0RNK3 | MapMan:5.4.10 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G01730_001]
Coordinates
chr11:+:1168949..1169373
Molecular Weight (calculated)
7678.5 Da
IEP (calculated)
10.008
GRAVY (calculated)
-0.303
Length
66 amino acids
Sequence
(BLAST)
(BLAST)
1: MHNFLISNHG FLFGGGLYGC TRYCLHHGQP SKDPAKNLKQ YHLNHHFRIQ VCIIAERKCV CRVIKK
001: MVAQGFTVDL KKPLVFQVGH LGEDYEEWVH QPIATKEGPR FFQSDFWEFL TLTVWWAVPV IWLPVVVWCI SRSVSMGCSL PEIVPIVVMG IFIWTFFEYV
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ
Arabidopsis Description
FAH1FAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.