Factsheet for Bra005394.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 4
golgi 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005564.1-P
Bra021809.1-P
Bra022898.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34770.1	Bra005564.1-P	AT2G32720.1	19054355
AT2G34770.1	Bra021809.1-P	AT2G32720.1	19054355
AT2G34770.1	Bra022898.1-P	AT2G32720.1	19054355

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31640	Canola	cytosol, golgi, plasma membrane	80.17	86.76
AT2G34770.1	Thale cress	cytosol	83.54	83.54
GSMUA_Achr11P...	Banana	cytosol	74.68	74.68
GSMUA_Achr8P14090_001	Banana	cytosol	74.26	74.26
KRH36837	Soybean	endoplasmic reticulum, plasma membrane	71.73	72.03
EES16419	Sorghum	endoplasmic reticulum	69.2	69.2
Zm00001d034319_P001	Maize	cytosol	68.78	68.78
EER93353	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	68.78	68.78
HORVU0Hr1G009740.7	Barley	cytosol	68.35	68.35
TraesCS5A01G019200.1	Wheat	cytosol	68.35	68.35
TraesCS5D01G024600.1	Wheat	cytosol	67.93	67.93
TraesCS5D01G424200.1	Wheat	cytosol	67.09	67.09
Bra013479.1-P	Field mustard	cytosol	66.67	66.67
Os12t0628400-01	Rice	cytosol	66.67	66.39
TraesCS5B01G016700.1	Wheat	cytosol	66.67	66.39
TraesCS5B01G418800.1	Wheat	cytosol	66.24	66.24
GSMUA_Achr2P10740_001	Banana	cytosol	65.82	65.82
KRH11817	Soybean	cytosol, golgi, plasma membrane	71.73	65.64
KRH58400	Soybean	cytosol, endoplasmic reticulum, plasma membrane	65.4	64.85
KRH42277	Soybean	endoplasmic reticulum, plasma membrane	65.4	64.85
Zm00001d031149_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	70.04	62.17
TraesCS5A01G416500.2	Wheat	endoplasmic reticulum, plasma membrane	65.82	59.54
VIT_10s0003g05380.t01	Wine grape	plastid	70.89	56.95
GSMUA_Achr2P10760_001	Banana	cytosol	16.88	53.33
GSMUA_Achr11P...	Banana	extracellular	12.24	43.94
HORVU5Hr1G100890.11	Barley	plastid	63.29	42.37

Protein Annotations

MapMan:5.4.10	EnsemblPlantsGene:Bra005394	EnsemblPlants:Bra005394.1	EnsemblPlants:Bra005394.1-P	InterPro:Fatty_acid_hydroxylase	GO:GO:0000038
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008610	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	UniProt:M4CMF6	PFAM:PF04116	PANTHER:PTHR12863
PANTHER:PTHR12863:SF7	TMHMM:TMhelix	UniParc:UPI0002547FFD	:	:	:

Description

AT2G34770 (E=1e-126) FAH1 | FAH1 (FATTY ACID HYDROXYLASE 1); catalytic/ fatty acid alpha-hydroxylase

Coordinates

chrA05:-:5196478..5197719

Molecular Weight (calculated)

27349.4 Da

IEP (calculated)

9.660

GRAVY (calculated)

0.146

Length

237 amino acids

Sequence
(BLAST)

001: MVAQGFSVDL NKPLVFLVGH LGETYEEWVH QPIVTKKGPR FFHSDFWEFL TLTVWWAVPV IWLPGSVWCI SMSVSRGLSL PEIAPLIALG IFIWTLIEYT
101: LHRFLFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP AATAVLCFPF WNLVKLFTTP SVTPALFGGG MFGYVMYDVT HYYLHHAHPT RAVTKNLKKY
201: HLSHHFRIHD KGFGVTSSLW DIVFGTLPTT KSPKREQ

Best Arabidopsis Sequence Match ( AT2G34770.1 )
(BLAST)

001: MVAQGFTVDL KKPLVFQVGH LGEDYEEWVH QPIATKEGPR FFQSDFWEFL TLTVWWAVPV IWLPVVVWCI SRSVSMGCSL PEIVPIVVMG IFIWTFFEYV
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ

Arabidopsis Description

FAH1FAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.