Factsheet for VIT_10s0003g05380.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054396	Potato	cytosol	63.39	79.24
GSMUA_Achr11P...	Banana	cytosol	62.03	77.22
KRH36837	Soybean	endoplasmic reticulum, plasma membrane	61.69	77.12
Solyc02g070050.2.1	Tomato	extracellular	42.03	77.02
AT2G34770.1	Thale cress	cytosol	60.68	75.53
VIT_10s0003g05370.t01	Wine grape	cytosol	60.0	74.68
GSMUA_Achr8P14090_001	Banana	cytosol	59.66	74.26
Solyc02g022890.1.1	Tomato	extracellular	17.29	73.91
EER93353	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	58.64	73.0
EES16419	Sorghum	endoplasmic reticulum	58.64	73.0
TraesCS5D01G424200.1	Wheat	cytosol	58.31	72.57
Zm00001d034319_P001	Maize	cytosol	57.97	72.15
TraesCS5B01G418800.1	Wheat	cytosol	57.63	71.73
TraesCS5D01G024600.1	Wheat	cytosol	57.29	71.31
Bra013479.1-P	Field mustard	cytosol	57.29	71.31
KRH11817	Soybean	cytosol, golgi, plasma membrane	62.37	71.04
Os12t0628400-01	Rice	cytosol	57.29	71.01
TraesCS5A01G019200.1	Wheat	cytosol	56.95	70.89
Bra005394.1-P	Field mustard	plasma membrane	56.95	70.89
HORVU0Hr1G009740.7	Barley	cytosol	56.61	70.46
AT4G20870.2	Thale cress	cytosol	56.27	70.04
TraesCS5B01G016700.1	Wheat	cytosol	56.27	69.75
KRH58400	Soybean	cytosol, endoplasmic reticulum, plasma membrane	56.27	69.46
KRH42277	Soybean	endoplasmic reticulum, plasma membrane	56.27	69.46
GSMUA_Achr2P10740_001	Banana	cytosol	54.24	67.51
PGSC0003DMT400019648	Potato	plasma membrane	55.59	65.86
TraesCS5A01G416500.2	Wheat	endoplasmic reticulum, plasma membrane	57.97	65.27
Zm00001d031149_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	58.98	65.17
GSMUA_Achr2P10760_001	Banana	cytosol	13.56	53.33
GSMUA_Achr11P...	Banana	extracellular	11.53	51.52
CDY37569	Canola	cytosol	18.31	51.43
HORVU5Hr1G100890.11	Barley	plastid	54.58	45.48

Protein Annotations

EntrezGene:100260984	wikigene:100260984	MapMan:5.4.10	ProteinID:CBI31058	ProteinID:CBI31058.3	UniProt:D7TKN6
EMBL:FN595992	InterPro:Fatty_acid_hydroxylase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006629
GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0008610	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	GO:GO:0080132	EntrezGene:LOC100260984
wikigene:LOC100260984	PFAM:PF04116	PANTHER:PTHR12863	PANTHER:PTHR12863:SF7	TIGR:TC58259	TMHMM:TMhelix
UniParc:UPI0001BE369A	ArrayExpress:VIT_10s0003g05380	EnsemblPlantsGene:VIT_10s0003g05380	EnsemblPlants:VIT_10s0003g05380.t01	unigene:Vvi.18535	RefSeq:XP_002268031
RefSeq:XP_002268031.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:+:9939900..9948904

Molecular Weight (calculated)

33384.5 Da

IEP (calculated)

9.501

GRAVY (calculated)

0.004

Length

295 amino acids

Sequence
(BLAST)

001: MDGHDLCFSC SSISPLSSSS SSSSSSSSLF TVSREARTEK TLATFTDPTS IFSVLGPKMV AQDFTVDLSK PLVFQVGHLG EDYQEWVHQP IVSKEGPRFF
101: DSDFWEALTR TKWWAIPLIW LPVVTWSISR SVRMGLELPR LVLMMAIGIF VWTLMEYSLH RFLFHIKTKT YWGNTIHYLL HGCHHKHPMD GLRLVFPPAG
201: AAVICVPLWN LIKFLSTPTT APALFGGGLL GYVMYDVTHY YLHHGQPSSK VPRNLKKYHL NHHFRIQDMG FGITSSLWDR VFGTLPPSKA PGKSR

Best Arabidopsis Sequence Match ( AT2G34770.1 )
(BLAST)

001: MVAQGFTVDL KKPLVFQVGH LGEDYEEWVH QPIATKEGPR FFQSDFWEFL TLTVWWAVPV IWLPVVVWCI SRSVSMGCSL PEIVPIVVMG IFIWTFFEYV
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ

Arabidopsis Description

FAH1FAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.