CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58400	Soybean	cytosol, endoplasmic reticulum, plasma membrane	99.16	99.16
KRH36837	Soybean	endoplasmic reticulum, plasma membrane	74.9	75.85
Solyc02g070050.2.1	Tomato	extracellular	48.95	72.67
GSMUA_Achr11P...	Banana	cytosol	71.55	72.15
PGSC0003DMT400054396	Potato	cytosol	70.29	71.19
GSMUA_Achr8P14090_001	Banana	cytosol	69.04	69.62
KRH11817	Soybean	cytosol, golgi, plasma membrane	74.06	68.34
Solyc02g022890.1.1	Tomato	extracellular	19.67	68.12
Zm00001d034319_P001	Maize	cytosol	67.36	67.93
EES16419	Sorghum	endoplasmic reticulum	66.95	67.51
Os12t0628400-01	Rice	cytosol	66.95	67.23
TraesCS5D01G024600.1	Wheat	cytosol	66.53	67.09
EER93353	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	66.53	67.09
HORVU0Hr1G009740.7	Barley	cytosol	65.69	66.24
TraesCS5A01G019200.1	Wheat	cytosol	65.69	66.24
AT2G34770.1	Thale cress	cytosol	65.27	65.82
TraesCS5B01G016700.1	Wheat	cytosol	65.27	65.55
Bra005394.1-P	Field mustard	plasma membrane	64.85	65.4
Bra013479.1-P	Field mustard	cytosol	64.44	64.98
AT4G20870.2	Thale cress	cytosol	64.44	64.98
TraesCS5D01G424200.1	Wheat	cytosol	64.02	64.56
TraesCS5B01G418800.1	Wheat	cytosol	63.18	63.71
GSMUA_Achr2P10740_001	Banana	cytosol	62.76	63.29
Zm00001d031149_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	67.36	60.3
PGSC0003DMT400019648	Potato	plasma membrane	61.51	59.04
TraesCS5A01G416500.2	Wheat	endoplasmic reticulum, plasma membrane	62.76	57.25
VIT_10s0003g05380.t01	Wine grape	plastid	69.46	56.27
GSMUA_Achr2P10760_001	Banana	cytosol	17.57	56.0
GSMUA_Achr11P...	Banana	extracellular	12.97	46.97
CDY37569	Canola	cytosol	19.67	44.76
HORVU5Hr1G100890.11	Barley	plastid	59.0	39.83

Protein Annotations

EntrezGene:100801061	MapMan:5.4.10	EMBL:ACUP02004795	InterPro:Fatty_acid_hydroxylase	EnsemblPlantsGene:GLYMA_08G081000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152
GO:GO:0008610	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0055114	GO:GO:0080132	UniProt:I1KRB8	EnsemblPlants:KRH42277	ProteinID:KRH42277	ProteinID:KRH42277.1
PFAM:PF04116	PANTHER:PTHR12863	PANTHER:PTHR12863:SF7	TMHMM:TMhelix	UniParc:UPI00023386D5	SEG:seg

Description

hypothetical protein

Coordinates

chr8:-:6132349..6135728

Molecular Weight (calculated)

27380.4 Da

IEP (calculated)

9.668

GRAVY (calculated)

0.088

Length

239 amino acids

Sequence
(BLAST)

001: MVAQKFVVDL NKPLVFQVGH LGEAYDEWVH DPIVSKEGPR FFQNGFLELF TRTAWWVIPT VWVPVASWFI SNSVKSGLPS LDVALLVFLG IFVWTLAEYT
101: LHRFLFHVKT KSYWGNTLHY LLHGCHHKHP MDSYRLVFPP VAAAILALPI WNLVKLICTP SVAPAVFGGI LLGYVMYDCT HYYLHHGQPK SDVPKSLKKY
201: HLNHHYRLQN YGFGITSPLW DKVFGTVPPP QSKGDAKRR

Best Arabidopsis Sequence Match ( AT2G34770.1 )
(BLAST)

001: MVAQGFTVDL KKPLVFQVGH LGEDYEEWVH QPIATKEGPR FFQSDFWEFL TLTVWWAVPV IWLPVVVWCI SRSVSMGCSL PEIVPIVVMG IFIWTFFEYV
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ

Arabidopsis Description

FAH1FAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.