Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- golgi 2
- extracellular 2
- cytosol 2
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79577 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 86.5 | 86.5 |
| CDX84628 | Canola | cytosol, endoplasmic reticulum, plastid | 86.5 | 86.5 |
| CDY43655 | Canola | cytosol, plasma membrane, plastid | 86.08 | 86.08 |
| CDY43657 | Canola | cytosol, plasma membrane, plastid | 86.08 | 86.08 |
| Bra005394.1-P | Field mustard | plasma membrane | 83.54 | 83.54 |
| CDY46240 | Canola | plasma membrane | 84.39 | 83.33 |
| CDY15865 | Canola | plasma membrane | 83.12 | 82.08 |
| CDX84282 | Canola | cytosol, endoplasmic reticulum, peroxisome | 80.59 | 77.33 |
| CDY31640 | Canola | cytosol, golgi, plasma membrane | 68.78 | 74.43 |
| GSMUA_Achr8P14090_001 | Banana | cytosol | 74.26 | 74.26 |
| GSMUA_Achr11P... | Banana | cytosol | 73.84 | 73.84 |
| KRH36837 | Soybean | endoplasmic reticulum, plasma membrane | 73.42 | 73.73 |
| EES16419 | Sorghum | endoplasmic reticulum | 72.15 | 72.15 |
| TraesCS5D01G024600.1 | Wheat | cytosol | 71.73 | 71.73 |
| TraesCS5A01G019200.1 | Wheat | cytosol | 71.31 | 71.31 |
| HORVU0Hr1G009740.7 | Barley | cytosol | 71.31 | 71.31 |
| Zm00001d034319_P001 | Maize | cytosol | 70.46 | 70.46 |
| EER93353 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 70.46 | 70.46 |
| TraesCS5B01G016700.1 | Wheat | cytosol | 70.46 | 70.17 |
| AT4G20870.2 | Thale cress | cytosol | 69.62 | 69.62 |
| Os12t0628400-01 | Rice | cytosol | 69.2 | 68.91 |
| TraesCS5D01G424200.1 | Wheat | cytosol | 68.35 | 68.35 |
| TraesCS5B01G418800.1 | Wheat | cytosol | 67.93 | 67.93 |
| GSMUA_Achr2P10740_001 | Banana | cytosol | 67.51 | 67.51 |
| KRH11817 | Soybean | cytosol, golgi, plasma membrane | 73.42 | 67.18 |
| KRH42277 | Soybean | endoplasmic reticulum, plasma membrane | 65.82 | 65.27 |
| KRH58400 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 65.82 | 65.27 |
| Zm00001d031149_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 72.15 | 64.04 |
| TraesCS5A01G416500.2 | Wheat | endoplasmic reticulum, plasma membrane | 67.93 | 61.45 |
| VIT_10s0003g05380.t01 | Wine grape | plastid | 75.53 | 60.68 |
| GSMUA_Achr2P10760_001 | Banana | cytosol | 17.3 | 54.67 |
| GSMUA_Achr11P... | Banana | extracellular | 13.08 | 46.97 |
| HORVU5Hr1G100890.11 | Barley | plastid | 64.14 | 42.94 |
Protein Annotations
| MapMan:5.4.10 | EntrezGene:818042 | UniProt:A0A178W0P1 | ProteinID:AAC16270.1 | ProteinID:AEC09019.1 | EMBL:AF021804 |
| ArrayExpress:AT2G34770 | EnsemblPlantsGene:AT2G34770 | RefSeq:AT2G34770 | TAIR:AT2G34770 | RefSeq:AT2G34770-TAIR-G | EnsemblPlants:AT2G34770.1 |
| TAIR:AT2G34770.1 | EMBL:AY050326 | Unigene:At.10506 | EMBL:BT000482 | Symbol:FAH1 | InterPro:Fatty_acid_hydroxylase |
| GO:GO:0000038 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006629 |
| GO:GO:0006631 | GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | RefSeq:NP_181023.1 |
| UniProt:O48916 | ProteinID:OAP11095.1 | PFAM:PF04116 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR12863 | PANTHER:PTHR12863:SF7 | TMHMM:TMhelix | UniParc:UPI0000035DBD | : |
Description
FAH1FAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P1]
Coordinates
chr2:+:14665667..14668250
Molecular Weight (calculated)
27423.5 Da
IEP (calculated)
9.102
GRAVY (calculated)
0.112
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAQGFTVDL KKPLVFQVGH LGEDYEEWVH QPIATKEGPR FFQSDFWEFL TLTVWWAVPV IWLPVVVWCI SRSVSMGCSL PEIVPIVVMG IFIWTFFEYV
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.