CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11817	Soybean	cytosol, golgi, plasma membrane	96.61	88.03
Solyc02g070050.2.1	Tomato	extracellular	55.51	81.37
GSMUA_Achr11P...	Banana	cytosol	78.81	78.48
GSMUA_Achr8P14090_001	Banana	cytosol	78.39	78.06
PGSC0003DMT400054396	Potato	cytosol	77.97	77.97
KRH42277	Soybean	endoplasmic reticulum, plasma membrane	75.85	74.9
KRH58400	Soybean	cytosol, endoplasmic reticulum, plasma membrane	75.0	74.06
Solyc02g022890.1.1	Tomato	extracellular	21.61	73.91
Zm00001d034319_P001	Maize	cytosol	74.15	73.84
AT2G34770.1	Thale cress	cytosol	73.73	73.42
EER93353	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	73.31	73.0
EES16419	Sorghum	endoplasmic reticulum	73.31	73.0
Bra005394.1-P	Field mustard	plasma membrane	72.03	71.73
TraesCS5D01G024600.1	Wheat	cytosol	72.03	71.73
HORVU0Hr1G009740.7	Barley	cytosol	71.61	71.31
TraesCS5D01G424200.1	Wheat	cytosol	71.61	71.31
TraesCS5A01G019200.1	Wheat	cytosol	71.61	71.31
AT4G20870.2	Thale cress	cytosol	71.61	71.31
Os12t0628400-01	Rice	cytosol	71.19	70.59
TraesCS5B01G016700.1	Wheat	cytosol	71.19	70.59
TraesCS5B01G418800.1	Wheat	cytosol	70.76	70.46
Bra013479.1-P	Field mustard	cytosol	70.34	70.04
GSMUA_Achr2P10740_001	Banana	cytosol	67.8	67.51
PGSC0003DMT400019648	Potato	plasma membrane	70.34	66.67
Zm00001d031149_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	72.88	64.42
TraesCS5A01G416500.2	Wheat	endoplasmic reticulum, plasma membrane	69.92	62.98
VIT_10s0003g05380.t01	Wine grape	plastid	77.12	61.69
GSMUA_Achr2P10760_001	Banana	cytosol	18.22	57.33
GSMUA_Achr11P...	Banana	extracellular	14.41	51.52
CDY37569	Canola	cytosol	19.92	44.76
HORVU5Hr1G100890.11	Barley	plastid	66.95	44.63

Protein Annotations

EntrezGene:100784159	MapMan:5.4.10	EMBL:ACUP02005398	ncoils:Coil	InterPro:Fatty_acid_hydroxylase	EnsemblPlantsGene:GLYMA_09G026800
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150
GO:GO:0008152	GO:GO:0008610	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0055114	GO:GO:0080132	UniProt:I1L0H3	ProteinID:KRH36836.1	EnsemblPlants:KRH36837
ProteinID:KRH36837	ProteinID:KRH36837.1	ProteinID:KRH36838.1	PFAM:PF04116	PANTHER:PTHR12863	PANTHER:PTHR12863:SF7
TMHMM:TMhelix	UniParc:UPI000233C1B5	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:2185005..2189508

Molecular Weight (calculated)

27213.6 Da

IEP (calculated)

8.864

GRAVY (calculated)

0.195

Length

236 amino acids

Sequence
(BLAST)

001: MVVQNFVVDL NKALVFQVGH LGGAYEEWVH QPIVSNEGPR FFENEILEFL TRTVWWAIPV IWLPVVCWFI HNSVQMGLSC PHLALLVVLG IFVWTLLEYS
101: LHRFLFHIKT KTYWGNTLHY LLHGCHHKHP MDGLRLVFPP AATAILLMPF WNLVKLMATP STAPALFGGG LLGYVMYDCT HYYLHHGQPK TEVPRNLKKY
201: HLNHHFRIQD KGFGITSSLW DKVFGTLPPK MDAKSM

Best Arabidopsis Sequence Match ( AT4G20870.2 )
(BLAST)

001: MVAERYTVDL NKPLVFQVGH LGEEYQEWIH QPIVCVEGPR FFESDFWEFL TRTVWWAIPT IWLPVVCYVL SISASKGLTF PQIGLIVAFG VLTWTLLEYT
101: LHRFLFHIQT KSYWANTAHY LLHGCHHKHP QDGLRLVFPP TATAILLVPL WKLLHLLATP ATAPAILGGI LFGYVMYDIT HYYLHHGQPK EPTFKHLKKY
201: HLNHHFRIQD KGYGITSSLW DKVFGTLPGI KAAAKKS

Arabidopsis Description

FAH2Dihydroceramide fatty acyl 2-hydroxylase FAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.