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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G424200.1 Wheat cytosol 98.31 98.31
TraesCS5A01G416500.2 Wheat endoplasmic reticulum, plasma membrane 95.36 86.26
Zm00001d034319_P001 Maize cytosol 82.7 82.7
EER93353 Sorghum cytosol, endoplasmic reticulum, plasma membrane 82.28 82.28
GSMUA_Achr8P14090_001 Banana cytosol 76.79 76.79
GSMUA_Achr11P... Banana cytosol 75.95 75.95
TraesCS5B01G016700.1 Wheat cytosol 73.84 73.53
PGSC0003DMT400054396 Potato cytosol 71.31 71.61
Solyc02g070050.2.1 Tomato extracellular 48.1 70.81
KRH36837 Soybean endoplasmic reticulum, plasma membrane 70.46 70.76
CDX84628 Canola cytosol, endoplasmic reticulum, plastid 70.04 70.04
CDX79577 Canola cytosol, endoplasmic reticulum, plasma membrane 69.62 69.62
CDY43655 Canola cytosol, plasma membrane, plastid 68.35 68.35
CDY43657 Canola cytosol, plasma membrane, plastid 68.35 68.35
AT2G34770.1 Thale cress cytosol 67.93 67.93
Bra005394.1-P Field mustard plasma membrane 66.24 66.24
CDY46240 Canola plasma membrane 66.24 65.42
GSMUA_Achr2P10740_001 Banana cytosol 65.4 65.4
KRH11817 Soybean cytosol, golgi, plasma membrane 71.31 65.25
CDY15865 Canola plasma membrane 65.82 65.0
Solyc02g022890.1.1 Tomato extracellular 18.57 63.77
KRH42277 Soybean endoplasmic reticulum, plasma membrane 63.71 63.18
CDX84282 Canola cytosol, endoplasmic reticulum, peroxisome 65.82 63.16
KRH58400 Soybean cytosol, endoplasmic reticulum, plasma membrane 62.87 62.34
GSMUA_Achr2P10760_001 Banana cytosol 19.41 61.33
HORVU5Hr1G100890.11 Barley plastid 89.87 60.17
CDY31640 Canola cytosol, golgi, plasma membrane 55.27 59.82
VIT_10s0003g05380.t01 Wine grape plastid 71.73 57.63
PGSC0003DMT400019648 Potato plasma membrane 60.34 57.43
GSMUA_Achr11P... Banana extracellular 15.19 54.55
Protein Annotations
EnsemblPlants:TraesCS5B01G418800.1EnsemblPlantsGene:TraesCS5B01G418800GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0008610GO:GO:0009058GO:GO:0016491
GO:GO:0055114InterPro:Fatty_acid_hydroxylasePANTHER:PTHR12863PANTHER:PTHR12863:SF2PFAM:PF04116TMHMM:TMhelix
MapMan:5.4.10:::::
Description
No Description!
Coordinates
chr5B:+:594906963..594908460
Molecular Weight (calculated)
27313.3 Da
IEP (calculated)
8.868
GRAVY (calculated)
0.130
Length
237 amino acids
Sequence
(BLAST)
001: MVVKEFTVDL NKPLVLQVGH LEEHYQEWVH QPVVSKEGPR FFANDTMEFL TRTKWWAVPV IWLPVVCWLF AKSVRMGHTI QEVILMALFG VFVWTLIEYS
101: LHRFLFHIET RSYWSNTAHY LIHGCHHKHP MDSLRLVFPP AGAAIICVPF WNVVAFFASP STTPALFAGG LLGYVMYDCT HYYLHHGQPS RDPAKHLKRY
201: HLGHHFRIQD KGFGITSSLW DAVFGTLPSS KIAAKLS
Best Arabidopsis Sequence Match ( AT4G20870.2 )
(BLAST)
001: MVAERYTVDL NKPLVFQVGH LGEEYQEWIH QPIVCVEGPR FFESDFWEFL TRTVWWAIPT IWLPVVCYVL SISASKGLTF PQIGLIVAFG VLTWTLLEYT
101: LHRFLFHIQT KSYWANTAHY LLHGCHHKHP QDGLRLVFPP TATAILLVPL WKLLHLLATP ATAPAILGGI LFGYVMYDIT HYYLHHGQPK EPTFKHLKKY
201: HLNHHFRIQD KGYGITSSLW DKVFGTLPGI KAAAKKS
Arabidopsis Description
FAH2Dihydroceramide fatty acyl 2-hydroxylase FAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUC5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.