Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- golgi 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G114360.3 | |
| HORVU5Hr1G045040.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G34770.1 | HORVU3Hr1G114360.3 | AT2G32720.1 | 19054355 |
| AT2G34770.1 | HORVU5Hr1G045040.1 | AT2G32720.1 | 19054355 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G424200.1 | Wheat | cytosol | 60.73 | 90.72 |
| TraesCS5B01G418800.1 | Wheat | cytosol | 60.17 | 89.87 |
| TraesCS5A01G416500.2 | Wheat | endoplasmic reticulum, plasma membrane | 60.73 | 82.06 |
| Zm00001d034319_P001 | Maize | cytosol | 52.82 | 78.9 |
| EER93353 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 52.82 | 78.9 |
| GSMUA_Achr8P14090_001 | Banana | cytosol | 49.15 | 73.42 |
| GSMUA_Achr11P... | Banana | cytosol | 48.87 | 73.0 |
| HORVU0Hr1G009740.7 | Barley | cytosol | 47.74 | 71.31 |
| Solyc02g070050.2.1 | Tomato | extracellular | 32.2 | 70.81 |
| PGSC0003DMT400054396 | Potato | cytosol | 45.2 | 67.8 |
| KRH36837 | Soybean | endoplasmic reticulum, plasma membrane | 44.63 | 66.95 |
| Solyc02g022890.1.1 | Tomato | extracellular | 12.99 | 66.67 |
| CDX84628 | Canola | cytosol, endoplasmic reticulum, plastid | 44.07 | 65.82 |
| CDX79577 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 43.79 | 65.4 |
| CDY43655 | Canola | cytosol, plasma membrane, plastid | 42.94 | 64.14 |
| AT2G34770.1 | Thale cress | cytosol | 42.94 | 64.14 |
| CDY43657 | Canola | cytosol, plasma membrane, plastid | 42.94 | 64.14 |
| Bra005394.1-P | Field mustard | plasma membrane | 42.37 | 63.29 |
| KRH11817 | Soybean | cytosol, golgi, plasma membrane | 46.05 | 62.93 |
| CDY46240 | Canola | plasma membrane | 42.66 | 62.92 |
| CDY15865 | Canola | plasma membrane | 42.37 | 62.5 |
| GSMUA_Achr2P10740_001 | Banana | cytosol | 41.53 | 62.03 |
| CDX84282 | Canola | cytosol, endoplasmic reticulum, peroxisome | 42.09 | 60.32 |
| GSMUA_Achr2P10760_001 | Banana | cytosol | 12.71 | 60.0 |
| CDY31640 | Canola | cytosol, golgi, plasma membrane | 36.72 | 59.36 |
| KRH42277 | Soybean | endoplasmic reticulum, plasma membrane | 39.83 | 59.0 |
| KRH58400 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 39.27 | 58.16 |
| PGSC0003DMT400019648 | Potato | plasma membrane | 38.42 | 54.62 |
| VIT_10s0003g05380.t01 | Wine grape | plastid | 45.48 | 54.58 |
| GSMUA_Achr11P... | Banana | extracellular | 10.17 | 54.55 |
Protein Annotations
| MapMan:5.4.10 | UniProt:A0A287SHR6 | InterPro:Fatty_acid_hydroxylase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 |
| GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:HORVU5Hr1G100890 |
| EnsemblPlants:HORVU5Hr1G100890.11 | PFAM:PF04116 | PANTHER:PTHR12863 | PANTHER:PTHR12863:SF2 | TMHMM:TMhelix | UniParc:UPI000B487DC1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:612202135..612205261
Molecular Weight (calculated)
40199.9 Da
IEP (calculated)
10.922
GRAVY (calculated)
-0.224
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: LQIRPREKQQ IALAPIPAGP TRQRRRKGRA ERPSLRRPPF AGNPSPSRPF PPRRHPSFLP LLPPRPSPSL SPSRRLGPGT GDANRRTASP PLSPAARHCR
101: FFPSAALIDW GRVEDGCPGV RRRSRQASCF PAMKVGHLEE HYQEWVHQPI VSKEGPRFFA NDTMEFLTRT KWWAVPVIWL PVVCWLFAKS ILMGHTIQEL
201: ILMALFGVFV WTLIEYSLHR FLFHIETKSY WSNTAHYLIH GCHHKHPMDS LRLVFPPAGA AILCVPFWNV VAFFASPSTT PALFAGGLLG YVMYDCTHYY
301: LHHGQPSIDP AKHLKRYHLS HHFRIQDKGF GITSSLWDAV FGTLPSSKIA VKLS
101: FFPSAALIDW GRVEDGCPGV RRRSRQASCF PAMKVGHLEE HYQEWVHQPI VSKEGPRFFA NDTMEFLTRT KWWAVPVIWL PVVCWLFAKS ILMGHTIQEL
201: ILMALFGVFV WTLIEYSLHR FLFHIETKSY WSNTAHYLIH GCHHKHPMDS LRLVFPPAGA AILCVPFWNV VAFFASPSTT PALFAGGLLG YVMYDCTHYY
301: LHHGQPSIDP AKHLKRYHLS HHFRIQDKGF GITSSLWDAV FGTLPSSKIA VKLS
001: MVAQGFTVDL KKPLVFQVGH LGEDYEEWVH QPIATKEGPR FFQSDFWEFL TLTVWWAVPV IWLPVVVWCI SRSVSMGCSL PEIVPIVVMG IFIWTFFEYV
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ
Arabidopsis Description
FAH1FAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.