CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
golgi 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36837	Soybean	endoplasmic reticulum, plasma membrane	88.03	96.61
Solyc02g070050.2.1	Tomato	extracellular	50.19	80.75
GSMUA_Achr8P14090_001	Banana	cytosol	72.2	78.9
GSMUA_Achr11P...	Banana	cytosol	72.2	78.9
PGSC0003DMT400054396	Potato	cytosol	71.81	78.81
Zm00001d034319_P001	Maize	cytosol	68.73	75.11
EER93353	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	67.95	74.26
KRH42277	Soybean	endoplasmic reticulum, plasma membrane	68.34	74.06
EES16419	Sorghum	endoplasmic reticulum	67.18	73.42
AT2G34770.1	Thale cress	cytosol	67.18	73.42
KRH58400	Soybean	cytosol, endoplasmic reticulum, plasma membrane	67.57	73.22
TraesCS5D01G024600.1	Wheat	cytosol	66.8	73.0
HORVU0Hr1G009740.7	Barley	cytosol	66.41	72.57
TraesCS5A01G019200.1	Wheat	cytosol	66.41	72.57
Solyc02g022890.1.1	Tomato	extracellular	19.3	72.46
TraesCS5D01G424200.1	Wheat	cytosol	66.02	72.15
TraesCS5B01G016700.1	Wheat	cytosol	66.02	71.85
Bra005394.1-P	Field mustard	plasma membrane	65.64	71.73
TraesCS5B01G418800.1	Wheat	cytosol	65.25	71.31
Os12t0628400-01	Rice	cytosol	65.25	71.01
AT4G20870.2	Thale cress	cytosol	64.86	70.89
Bra013479.1-P	Field mustard	cytosol	64.09	70.04
GSMUA_Achr2P10740_001	Banana	cytosol	62.93	68.78
PGSC0003DMT400019648	Potato	plasma membrane	64.48	67.07
TraesCS5A01G416500.2	Wheat	endoplasmic reticulum, plasma membrane	66.41	65.65
Zm00001d031149_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	67.18	65.17
VIT_10s0003g05380.t01	Wine grape	plastid	71.04	62.37
GSMUA_Achr2P10760_001	Banana	cytosol	16.6	57.33
GSMUA_Achr11P...	Banana	extracellular	13.13	51.52
CDY37569	Canola	cytosol	18.92	46.67
HORVU5Hr1G100890.11	Barley	plastid	62.93	46.05

Protein Annotations

EntrezGene:100820263	MapMan:5.4.10	EMBL:ACUP02009241	InterPro:Fatty_acid_hydroxylase	EnsemblPlantsGene:GLYMA_15G132500	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0008610	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0055114	UniProt:I1MG63	ProteinID:KRH11815.1	ProteinID:KRH11816.1	EnsemblPlants:KRH11817	ProteinID:KRH11817
ProteinID:KRH11817.1	PFAM:PF04116	PANTHER:PTHR12863	PANTHER:PTHR12863:SF7	TMHMM:TMhelix	UniParc:UPI00023D28A1

Description

hypothetical protein

Coordinates

chr15:+:10645547..10651342

Molecular Weight (calculated)

30013.2 Da

IEP (calculated)

9.307

GRAVY (calculated)

0.148

Length

259 amino acids

Sequence
(BLAST)

001: MPSGRQDKTI LVKFPNPCGM YCMMVVQNFV VDLNKALVFQ VGHLGEAYEE WVHQPIVSKE GPRFFENEIL EFLTRTVWWA IPVIWLPVVC WFIYKSIRMG
101: LSCPHLALLV VLGIFVWTLL EYSLHRFLFH IKTKTYWGNT LHYLLHGCHH KHPMDGLRLV FPPAATAILL MPFWNLVKLM ATTSTAPALF GGGLLGYVMY
201: DCTHYYLHHG QPRTEVPRNL KKYHLNHHFR IQDKGFGITS SLWDKVFGTL PPKMDAKSM

Best Arabidopsis Sequence Match ( AT2G34770.1 )
(BLAST)

001: MVAQGFTVDL KKPLVFQVGH LGEDYEEWVH QPIATKEGPR FFQSDFWEFL TLTVWWAVPV IWLPVVVWCI SRSVSMGCSL PEIVPIVVMG IFIWTFFEYV
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ

Arabidopsis Description

FAH1FAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.