Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
- golgi 2
- cytosol 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79011 | Canola | cytosol | 100.0 | 100.0 |
| CDX82786 | Canola | cytosol | 99.58 | 99.58 |
| AT4G20870.2 | Thale cress | cytosol | 94.94 | 94.94 |
| PGSC0003DMT400054396 | Potato | cytosol | 75.53 | 75.85 |
| Solyc02g070050.2.1 | Tomato | extracellular | 49.37 | 72.67 |
| KRH36837 | Soybean | endoplasmic reticulum, plasma membrane | 70.04 | 70.34 |
| Bra005394.1-P | Field mustard | plasma membrane | 66.67 | 66.67 |
| KRH42277 | Soybean | endoplasmic reticulum, plasma membrane | 64.98 | 64.44 |
| KRH58400 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 64.98 | 64.44 |
| KRH11817 | Soybean | cytosol, golgi, plasma membrane | 70.04 | 64.09 |
| Solyc02g022890.1.1 | Tomato | extracellular | 18.14 | 62.32 |
| PGSC0003DMT400019648 | Potato | plasma membrane | 64.56 | 61.45 |
| VIT_10s0003g05380.t01 | Wine grape | plastid | 71.31 | 57.29 |
Protein Annotations
| MapMan:5.4.10 | EnsemblPlantsGene:Bra013479 | EnsemblPlants:Bra013479.1 | EnsemblPlants:Bra013479.1-P | InterPro:Fatty_acid_hydroxylase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 |
| GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | UniProt:M4DAG9 |
| PFAM:PF04116 | PANTHER:PTHR12863 | PANTHER:PTHR12863:SF7 | TMHMM:TMhelix | UniParc:UPI0002546BD4 | : |
Description
AT4G20870 (E=7e-140) FAH2, ATFAH2 | FAH2 (FATTY ACID HYDROXYLASE 2); catalytic/ fatty acid alpha-hydroxylase
Coordinates
chrA01:-:5897573..5898777
Molecular Weight (calculated)
27469.6 Da
IEP (calculated)
9.238
GRAVY (calculated)
0.091
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAERFTVDL DKPLVFQVGH LGEEYQEWIH QPIVCVEGPR FFQSDFWEFL TRTVWWAIPT IWLPVVCYVL SISARKGLTF PQIGLIVAFG VLTWTLLEYT
101: LHRFLFHIET KSYWANTAHY LLHGCHHKHP QDGLRLVFPP TATAILLVPL WKLLHLIATP ATAPAMLGGI LFGYVMYDVT HYYLHHGQPK EPTFKHLKKY
201: HLNHHFRIQD KGYGITSSLW DRVFGTLPGT KAAQKKL
101: LHRFLFHIET KSYWANTAHY LLHGCHHKHP QDGLRLVFPP TATAILLVPL WKLLHLIATP ATAPAMLGGI LFGYVMYDVT HYYLHHGQPK EPTFKHLKKY
201: HLNHHFRIQD KGYGITSSLW DRVFGTLPGT KAAQKKL
001: MVAERYTVDL NKPLVFQVGH LGEEYQEWIH QPIVCVEGPR FFESDFWEFL TRTVWWAIPT IWLPVVCYVL SISASKGLTF PQIGLIVAFG VLTWTLLEYT
101: LHRFLFHIQT KSYWANTAHY LLHGCHHKHP QDGLRLVFPP TATAILLVPL WKLLHLLATP ATAPAILGGI LFGYVMYDIT HYYLHHGQPK EPTFKHLKKY
201: HLNHHFRIQD KGYGITSSLW DKVFGTLPGI KAAAKKS
101: LHRFLFHIQT KSYWANTAHY LLHGCHHKHP QDGLRLVFPP TATAILLVPL WKLLHLLATP ATAPAILGGI LFGYVMYDIT HYYLHHGQPK EPTFKHLKKY
201: HLNHHFRIQD KGYGITSSLW DKVFGTLPGI KAAAKKS
Arabidopsis Description
FAH2Dihydroceramide fatty acyl 2-hydroxylase FAH2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUC5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.