Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84282 | Canola | cytosol, endoplasmic reticulum, peroxisome | 56.19 | 23.89 |
| CDX79577 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 53.33 | 23.63 |
| CDX84628 | Canola | cytosol, endoplasmic reticulum, plastid | 53.33 | 23.63 |
| CDY43655 | Canola | cytosol, plasma membrane, plastid | 51.43 | 22.78 |
| CDY43657 | Canola | cytosol, plasma membrane, plastid | 51.43 | 22.78 |
| CDY46240 | Canola | plasma membrane | 51.43 | 22.5 |
| CDY15865 | Canola | plasma membrane | 50.48 | 22.08 |
| CDX79011 | Canola | cytosol | 48.57 | 21.52 |
| CDX82786 | Canola | cytosol | 48.57 | 21.52 |
| KRH36837 | Soybean | endoplasmic reticulum, plasma membrane | 44.76 | 19.92 |
| KRH42277 | Soybean | endoplasmic reticulum, plasma membrane | 44.76 | 19.67 |
| KRH58400 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 44.76 | 19.67 |
| KRH11817 | Soybean | cytosol, golgi, plasma membrane | 46.67 | 18.92 |
| VIT_10s0003g05380.t01 | Wine grape | plastid | 51.43 | 18.31 |
| CDY31640 | Canola | cytosol, golgi, plasma membrane | 17.14 | 8.22 |
Protein Annotations
| EnsemblPlants:CDY37569 | EnsemblPlantsGene:GSBRNA2T00064198001 | PANTHER:PTHR12863 | PANTHER:PTHR12863:SF7 | ProteinID:CDY37569 | ProteinID:CDY37569.1 |
| UniParc:UPI0004EEDB0B | UniProt:A0A078HJW9 | MapMan:5.4.10 | : | : | : |
Description
BnaA02g20010DBnaA02g20010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJW9]
Coordinates
chrLK032403:-:115982..116586
Molecular Weight (calculated)
12108.1 Da
IEP (calculated)
7.853
GRAVY (calculated)
-0.910
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAEGFTVDL NKPLVFQVGH LGETYEEWVH QPIVTKKGPR FFHSDFWEPS QEPKPDYIKT TRSPINNNGH NENAKRAFSP NSETTRAKWK ARQGGWLDTW
101: GDLLP
101: GDLLP
001: MVAQGFTVDL KKPLVFQVGH LGEDYEEWVH QPIATKEGPR FFQSDFWEFL TLTVWWAVPV IWLPVVVWCI SRSVSMGCSL PEIVPIVVMG IFIWTFFEYV
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ
Arabidopsis Description
FAH1FAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.