Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
- golgi 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400019647 | Potato | cytosol | 67.93 | 68.22 |
| VIT_10s0003g05380.t01 | Wine grape | plastid | 74.68 | 60.0 |
| Solyc02g022910.2.1 | Tomato | plasma membrane, plastid | 67.51 | 55.17 |
Protein Annotations
| EntrezGene:100266188 | wikigene:100266188 | MapMan:5.4.10 | EMBL:AM483424 | ProteinID:CAN81862 | ProteinID:CAN81862.1 |
| ProteinID:CBI31057 | ProteinID:CBI31057.3 | UniProt:D7TKN5 | EMBL:FN595992 | InterPro:Fatty_acid_hydroxylase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006629 | GO:GO:0006631 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0030145 | GO:GO:0045735 | GO:GO:0046872 | GO:GO:0055114 | GO:GO:0080132 |
| EntrezGene:LOC100266188 | wikigene:LOC100266188 | PFAM:PF04116 | PANTHER:PTHR12863 | PANTHER:PTHR12863:SF7 | TMHMM:TMhelix |
| UniParc:UPI00015CAE86 | ArrayExpress:VIT_10s0003g05370 | EnsemblPlantsGene:VIT_10s0003g05370 | EnsemblPlants:VIT_10s0003g05370.t01 | RefSeq:XP_002267991 | RefSeq:XP_002267991.1 |
| RefSeq:XP_019078046.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:9919320..9920757
Molecular Weight (calculated)
27040.2 Da
IEP (calculated)
9.659
GRAVY (calculated)
0.120
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSKDFTVDL NKPLVFQVGH LGEAYEEWVH QPIISKEGPR FFGSDILEST TRTVWWVIPL VWLPVVCWAV SMSVRMGLPL LQLAAAVAGG LFIWTFLEYT
101: LHRFLFHIKT KSYWGNTIHY LLHGCHHKHP MDGLRLVFPP AAAAILCLPF WNLMKLLSPP SVAPTLFGGG LLGYVIYDVT HYYLHHGKPS KGITQNMKRY
201: HMNHHFRIDD KGFGITSTFW DRVFGTLPPA KAAEKSR
101: LHRFLFHIKT KSYWGNTIHY LLHGCHHKHP MDGLRLVFPP AAAAILCLPF WNLMKLLSPP SVAPTLFGGG LLGYVIYDVT HYYLHHGKPS KGITQNMKRY
201: HMNHHFRIDD KGFGITSTFW DRVFGTLPPA KAAEKSR
001: MVAQGFTVDL KKPLVFQVGH LGEDYEEWVH QPIATKEGPR FFQSDFWEFL TLTVWWAVPV IWLPVVVWCI SRSVSMGCSL PEIVPIVVMG IFIWTFFEYV
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ
Arabidopsis Description
FAH1FAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.