Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- cytosol 1
- vacuole 3
- extracellular 2
- endoplasmic reticulum 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400019647 | Potato | cytosol | 78.97 | 97.03 |
| VIT_10s0003g05370.t01 | Wine grape | cytosol | 55.17 | 67.51 |
| Solyc02g070050.2.1 | Tomato | extracellular | 34.48 | 62.11 |
| Solyc02g022890.1.1 | Tomato | extracellular | 14.14 | 59.42 |
Protein Annotations
| MapMan:5.4.10 | InterPro:Fatty_acid_hydroxylase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006629 |
| GO:GO:0006631 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008610 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | GO:GO:0080132 | UniProt:K4B539 |
| PFAM:PF04116 | PANTHER:PTHR12863 | PANTHER:PTHR12863:SF7 | EnsemblPlantsGene:Solyc02g022910.2 | EnsemblPlants:Solyc02g022910.2.1 | TMHMM:TMhelix |
| UniParc:UPI00027689FE | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:24396573..24399434
Molecular Weight (calculated)
33730.3 Da
IEP (calculated)
9.834
GRAVY (calculated)
0.147
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSNFLHHNF QRLDISNYIF TPSFSFIFYL DFFVFPIRNF LQSNIQRSNN TGAKMVAQGF IVDLNKPLIF QVGHLGDSYE EWVHQPIISK GSPRFFENDI
101: LEFLTRTVWW AIPSVWLPIV GWLVWISLKR GGGISELFLT LLGGIFLWTF LEYTLHRFVF HMKPSGYWAN TLHYLIHGCH HKHPMDGLRL VFPPAATAIL
201: LLPLWSVIKL LVPFTYAPAF LGGGLLGYII YDCTHYYLHH GKPFKGISHS LKRYHMDHHF KLQDKGYGIT SKFWDIIFGT LPPKPTNKIK
101: LEFLTRTVWW AIPSVWLPIV GWLVWISLKR GGGISELFLT LLGGIFLWTF LEYTLHRFVF HMKPSGYWAN TLHYLIHGCH HKHPMDGLRL VFPPAATAIL
201: LLPLWSVIKL LVPFTYAPAF LGGGLLGYII YDCTHYYLHH GKPFKGISHS LKRYHMDHHF KLQDKGYGIT SKFWDIIFGT LPPKPTNKIK
001: MVAQGFTVDL KKPLVFQVGH LGEDYEEWVH QPIATKEGPR FFQSDFWEFL TLTVWWAVPV IWLPVVVWCI SRSVSMGCSL PEIVPIVVMG IFIWTFFEYV
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ
Arabidopsis Description
FAH1FAH1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0P1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.