Factsheet for Bra026782.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plastid 1
extracellular 1
golgi 1
plasma membrane 3
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012567.1-P
Bra013361.1-P
Bra026434.1-P
Bra026782.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G15080.1	Bra026782.1-P	AT1G15080.1	21798944
AT1G15080.1	Bra012567.1-P	AT4G19030.1	21798944
AT1G15080.1	Bra013361.1-P	AT4G19030.1	21798944
AT1G15080.1	Bra026434.1-P	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33719	Canola	plasma membrane	99.36	99.36
AT1G15080.1	Thale cress	plasma membrane	86.22	92.76
VIT_01s0011g04180.t01	Wine grape	plasma membrane	76.6	74.45
KRH38169	Soybean	plasma membrane	70.83	73.18
KRH35882	Soybean	nucleus	72.76	70.5
KRG90909	Soybean	plasma membrane	72.44	70.19
PGSC0003DMT400078534	Potato	endoplasmic reticulum, golgi, plasma membrane	69.55	67.18
Solyc05g008800.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	63.14	65.45
Bra024900.1-P	Field mustard	plasma membrane	55.13	59.11
Bra017464.1-P	Field mustard	plasma membrane	55.45	58.05
Bra022295.1-P	Field mustard	golgi	56.73	58.03
Bra001056.1-P	Field mustard	plasma membrane	55.13	57.14
Bra039179.1-P	Field mustard	endoplasmic reticulum, golgi, peroxisome	60.26	53.11
GSMUA_Achr6P01360_001	Banana	mitochondrion	36.22	31.56

Protein Annotations

Gene3D:1.20.144.10	MapMan:5.2.2.1	EnsemblPlantsGene:Bra026782	EnsemblPlants:Bra026782.1	EnsemblPlants:Bra026782.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0008152
GO:GO:0008195	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311	GO:GO:0016787
InterPro:LPP1/LPP2/LPP3_plant	UniProt:M4EDC2	PFAM:PF01569	PANTHER:PTHR10165	PANTHER:PTHR10165:SF138	InterPro:P_Acid_Pase_2/haloperoxi_sf
InterPro:P_Acid_Pase_2/haloperoxidase	SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0002542D1F	SEG:seg

Description

AT1G15080 (E=1e-151) ATPAP2, ATLPP2, LPP2 | LPP2 (LIPID PHOSPHATE PHOSPHATASE 2); acid phosphatase/ phosphatidate phosphatase

Coordinates

chrA09:-:33672248..33673966

Molecular Weight (calculated)

35266.7 Da

IEP (calculated)

6.921

GRAVY (calculated)

0.224

Length

312 amino acids

Sequence
(BLAST)

001: MPEIQLGAHT IRSHGVTVAR FHMHDWLILL LLIVIEVVLN VIEPFHRFVG EDMLTDLRYP LQDNTVPFWA VPLIAVVLPF VVISVYYFIR RDVYDLHHAI
101: LGLLFSVLIT GVITDAIKDA VGRPRPDFFW RCFPDGRGFF HNVTRDVLCT GDKNVVKEGH KSFPSGHTSW SFAGLGFLAL YLSGKIRVFD QRGHVAKLCI
201: VFLPLLVAAL VGVSRVDDYW HHWQDVFGGA IIGLTVASFC YLQFFPPPYD PDGWGPHAYF QMLADSRNVV QNSAGMNNLS VRQAELENVY VHQQGTSMEI
301: SRSNTRGTPQ EC

Best Arabidopsis Sequence Match ( AT1G15080.1 )
(BLAST)

001: MPEIHLGAHT IRSHGVTVAR FHMHDWLILL LLIVIEIVLN VIEPFHRFVG EDMLTDLRYP LQDNTIPFWA VPLIAVVLPF AVICVYYFIR NDVYDLHHAI
101: LGLLFSVLIT GVITDAIKDA VGRPRPDFFW RCFPDGIGIF HNVTKNVLCT GAKDVVKEGH KSFPSGHTSW SFAGLGFLSL YLSGKIRVFD QRGHVAKLCI
201: VILPLLVAAL VGVSRVDDYW HHWQDVFGGA IIGLTVATFC YLQFFPPPYD PDGWGPHAYF QMLADSRNDV QDSAGMNHLS VRQTELESVR

Arabidopsis Description

LPP2Lipid phosphate phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI60]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.