Factsheet for Bra039179.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, peroxisome

Predictor Summary:

nucleus 1
golgi 2
plastid 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, peroxisome
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57538	Canola	golgi, plasma membrane, plastid	97.46	95.3
Bra001056.1-P	Field mustard	plasma membrane	78.25	92.03
AT3G02600.1	Thale cress	plasma membrane	88.14	85.71
VIT_14s0006g02480.t01	Wine grape	plasma membrane	45.2	79.6
Bra024900.1-P	Field mustard	plasma membrane	52.26	63.57
GSMUA_Achr8P18310_001	Banana	plasma membrane	54.24	62.95
KRH01709	Soybean	mitochondrion	66.1	62.57
Bra017464.1-P	Field mustard	plasma membrane	50.85	60.4
OQU86360	Sorghum	plasma membrane	52.26	60.26
Bra026782.1-P	Field mustard	plasma membrane	53.11	60.26
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	53.11	60.06
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	52.26	56.23
Bra022295.1-P	Field mustard	golgi	48.02	55.74
Solyc02g086370.2.1	Tomato	mitochondrion, plasma membrane	60.73	55.56
PGSC0003DMT400078582	Potato	mitochondrion	60.17	54.76
Zm00001d008592_P003	Maize	plasma membrane	52.26	54.73
TraesCS3B01G060600.1	Wheat	peroxisome	50.56	54.41
TraesCS3D01G051000.3	Wheat	plasma membrane	52.54	49.08
HORVU3Hr1G008430.3	Barley	plastid	51.98	48.55

Protein Annotations

EnsemblPlants:Bra039179.1	EnsemblPlants:Bra039179.1-P	EnsemblPlantsGene:Bra039179	Gene3D:1.20.144.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:LPP1/LPP2/LPP3_plant	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	PANTHER:PTHR10165	PANTHER:PTHR10165:SF138
PFAM:PF01569	SEG:seg	SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI000254757B
UniProt:M4FDK8	MapMan:5.2.2.1	:	:	:	:

Description

AT3G02600 (E=2e-155) LPP3, ATLPP3 | LPP3 (LIPID PHOSPHATE PHOSPHATASE 3); phosphatidate phosphatase

Coordinates

chrA05:+:23604460..23606542

Molecular Weight (calculated)

39389.7 Da

IEP (calculated)

6.610

GRAVY (calculated)

0.178

Length

354 amino acids

Sequence
(BLAST)

001: MGIVIVAVTN RGPEVSGTAD NWVSPSDIPL IEPYSKEHKM REAQLGAHTV RSHGMTLART HMHDWIILVL LVILECILLI IHPFYRFVSK DMMTDLSFPL
101: KSNTVPIWTV PIYAMLLPLV IFIAIYFRRR DVYDLHHAVL GLLYSVLVTA VLTDSIKNAV GRPRPDFFWR CFPDGKAVYD SLGDVICHGD KSVIREGHKS
201: FPSGHTSWSF AGLGFLSLYL SGKIQAFDGK GHVAKLCIVI LPLLVAALVG ISRVDDYWHH WQDVFAGGLL GLVVSTFCYL QFFPPPYHTE AWGPYAYFQV
301: LEAARAQAQA AENGVAQGGN GEEEDGGFMG LHLVDNPSMR REDEDVEAGR VPRG

Best Arabidopsis Sequence Match ( AT3G02600.1 )
(BLAST)

001: MARFSFPCFP NFGGFNQAVT NRGPEISETA DNWVSPSDIP LIEPNSKEHR MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.