Factsheet for TraesCS3B01G060600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

mitochondrion 2
peroxisome 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	endoplasmic reticulum, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	93.62	93.62
OQU86360	Sorghum	plasma membrane	77.51	83.06
TraesCS3D01G051000.3	Wheat	plasma membrane	94.83	82.32
HORVU3Hr1G008430.3	Barley	plastid	92.1	79.95
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	72.04	75.72
Zm00001d008592_P003	Maize	plasma membrane	76.29	74.26
VIT_14s0006g02480.t01	Wine grape	plasma membrane	41.95	68.66
GSMUA_Achr8P18310_001	Banana	plasma membrane	57.75	62.3
Bra001056.1-P	Field mustard	plasma membrane	51.06	55.81
CDX92005	Canola	plasma membrane	54.41	55.76
CDX74243	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	54.1	55.45
Bra024900.1-P	Field mustard	plasma membrane	48.94	55.33
PGSC0003DMT400078535	Potato	plasma membrane	52.28	53.42
Bra017464.1-P	Field mustard	plasma membrane	48.33	53.36
Solyc05g008810.2.1	Tomato	nucleus	51.98	53.11
KRH35886	Soybean	plasma membrane	54.1	52.82
PGSC0003DMT400078418	Potato	plasma membrane	51.67	52.8
Solyc05g008820.2.1	Tomato	plasma membrane	51.37	52.48
CDY17691	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	50.15	52.22
KRG90908	Soybean	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane	53.8	51.91
KRH01709	Soybean	mitochondrion	58.97	51.87
TraesCS3B01G293300.1	Wheat	plasma membrane	46.2	51.7
Bra039179.1-P	Field mustard	endoplasmic reticulum, golgi, peroxisome	54.41	50.56
TraesCS3B01G270800.1	Wheat	plasma membrane	48.33	50.32
TraesCS7B01G241600.1	Wheat	plasma membrane	48.63	50.31
CDY43231	Canola	golgi, peroxisome, plasma membrane	55.02	50.0
CDY25943	Canola	plastid	48.94	49.85
TraesCS5B01G178200.1	Wheat	plasma membrane	48.33	49.84
AT2G01180.3	Thale cress	plasma membrane	49.85	49.7
CDY41071	Canola	plasma membrane	49.24	49.54
TraesCS1B01G393200.1	Wheat	plasma membrane	48.02	49.53
AT3G02600.1	Thale cress	plasma membrane	54.71	49.45
CDY57538	Canola	golgi, plasma membrane, plastid	54.41	49.45
TraesCS5B01G546500.1	Wheat	plasma membrane	47.11	49.36
Solyc02g086370.2.1	Tomato	mitochondrion, plasma membrane	56.53	48.06
PGSC0003DMT400078582	Potato	mitochondrion	56.53	47.81
CDY57516	Canola	plasma membrane	23.71	38.81
VIT_01s0011g04170.t01	Wine grape	plasma membrane	53.5	34.78
VIT_01s0011g04160.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.32	34.4

Protein Annotations

EnsemblPlants:TraesCS3B01G060600.1	EnsemblPlantsGene:TraesCS3B01G060600	Gene3D:1.20.144.10	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	PANTHER:PTHR10165
PANTHER:PTHR10165:SF80	PFAM:PF01569	SEG:seg	SMART:SM00014	SUPFAM:SSF48317	TIGR:cd03390
TMHMM:TMhelix	MapMan:5.2.2.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:32456481..32460068

Molecular Weight (calculated)

36634.2 Da

IEP (calculated)

8.567

GRAVY (calculated)

0.013

Length

329 amino acids

Sequence
(BLAST)

001: MRGGGNTQNC SQTTEVLGTP VSVQQDRMQQ VQHTVQTHGY GLARKHTYDW VVLTLLAAAV VVLHYAPPFN RFVGKDMMAD IRYPVKQSTV PAWAVPVISM
101: LCPVLVFVAV YVARRDVYDL HHATLGVIFA VLITAAFTDV IKTAVGRPRP DFFWRCFPDG RQVYDQVTGG VICHGEKGFL TDGRKSFPSG HTSWSFAGLG
201: FLSLYLSGKI KAFDRKGHVA KLCIVILPLL LASLVGVSRI DNYRHHWEDV LVGGLIGYIM AVLCYLHFFP PPYHHQGWGP YAYFHMLEEL EVHNSNNAQN
301: QQSAGEHHIG LTGQHHNGRS RNDLESGSV

Best Arabidopsis Sequence Match ( AT3G02600.1 )
(BLAST)

001: MARFSFPCFP NFGGFNQAVT NRGPEISETA DNWVSPSDIP LIEPNSKEHR MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.