CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008592_P003	Maize	plasma membrane	94.46	85.8
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	81.76	80.19
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	83.71	78.12
TraesCS3B01G060600.1	Wheat	peroxisome	83.06	77.51
VIT_14s0006g02480.t01	Wine grape	plasma membrane	46.58	71.14
TraesCS3D01G051000.3	Wheat	plasma membrane	84.04	68.07
HORVU3Hr1G008430.3	Barley	plastid	81.43	65.96
GSMUA_Achr8P18310_001	Banana	plasma membrane	63.84	64.26
Bra001056.1-P	Field mustard	plasma membrane	56.35	57.48
Solyc05g008810.2.1	Tomato	nucleus	59.93	57.14
Bra024900.1-P	Field mustard	plasma membrane	54.07	57.04
CDX74243	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	59.61	57.01
CDX92005	Canola	plasma membrane	59.61	57.01
OQU89253	Sorghum	plasma membrane	57.33	56.96
PGSC0003DMT400078535	Potato	plasma membrane	59.61	56.83
PGSC0003DMT400078418	Potato	plasma membrane	58.96	56.21
KXG24994	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	56.35	55.81
Solyc05g008820.2.1	Tomato	plasma membrane	58.31	55.59
Bra017464.1-P	Field mustard	plasma membrane	52.44	54.03
CDY17691	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	54.72	53.16
KRH35886	Soybean	plasma membrane	58.31	53.12
Bra039179.1-P	Field mustard	endoplasmic reticulum, golgi, peroxisome	60.26	52.26
KRG90908	Soybean	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane	57.98	52.2
KRH01709	Soybean	mitochondrion	63.52	52.14
EER90037	Sorghum	plasma membrane	54.4	51.7
CDY43231	Canola	golgi, peroxisome, plasma membrane	60.91	51.66
AT3G02600.1	Thale cress	plasma membrane	61.24	51.65
AT2G01180.3	Thale cress	plasma membrane	55.05	51.21
CDY57538	Canola	golgi, plasma membrane, plastid	60.26	51.1
EER90050	Sorghum	plastid	53.42	51.09
CDY25943	Canola	plastid	53.09	50.46
CDY41071	Canola	plasma membrane	53.75	50.46
EES19904	Sorghum	plasma membrane	53.42	50.31
Solyc02g086370.2.1	Tomato	mitochondrion, plasma membrane	61.56	48.84
PGSC0003DMT400078582	Potato	mitochondrion	60.91	48.07
KXG33171	Sorghum	plasma membrane	55.37	46.96
KXG33063	Sorghum	mitochondrion, plastid	52.77	42.19
CDY57516	Canola	plasma membrane	25.08	38.31
VIT_01s0011g04160.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.22	36.11
VIT_01s0011g04170.t01	Wine grape	plasma membrane	59.28	35.97

Protein Annotations

Gene3D:1.20.144.10	MapMan:5.2.2.1	UniProt:A0A1B6Q1X8	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	ProteinID:KXG31928.1	ProteinID:KXG31929.1	ProteinID:OQU86354.1	ProteinID:OQU86355.1
ProteinID:OQU86356.1	ProteinID:OQU86357.1	ProteinID:OQU86358.1	ProteinID:OQU86359.1	EnsemblPlants:OQU86360	ProteinID:OQU86360
ProteinID:OQU86360.1	ProteinID:OQU86361.1	ProteinID:OQU86362.1	PFAM:PF01569	PANTHER:PTHR10165	PANTHER:PTHR10165:SF80
InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	SMART:SM00014	EnsemblPlantsGene:SORBI_3003G078700	SUPFAM:SSF48317	TMHMM:TMhelix
UniParc:UPI0003C6812C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:6758539..6763230

Molecular Weight (calculated)

34557.8 Da

IEP (calculated)

8.007

GRAVY (calculated)

0.094

Length

307 amino acids

Sequence
(BLAST)

001: MREAQLGSHT IQTHGVRLAR KHTHDWVVLI LLAALVVALH FAPPFSRFVG KDMMTDIRYP VKPSTVPAWA VPMISILCPW IVFISIYVAR RDVYDLHNAA
101: LGVLFAVLIT AVFTDVIKTA VGRPRPDFFW RCFPDGNQLY DQVTGDVICH GEKSFLKDGR KSFPSGHTSW SFAGLGFLSL YLSGKIKAFD RQGHVAKLCI
201: VILPLLLASL VGVSRVDDYR HHWEDVFVGG LIGFIMAVLC YLHFFPPPYH DQGWRPYAYF HMLEELEVEA ANSNNAQNQQ STGGHHIAMS EQQHNRTSRN
301: DLESGSV

Best Arabidopsis Sequence Match ( AT3G02600.10 )
(BLAST)

001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.