CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 3
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90050	Sorghum	plastid	66.25	66.67
EES19904	Sorghum	plasma membrane	67.18	66.56
TraesCS1B01G393200.1	Wheat	plasma membrane	61.3	62.07
KXG24994	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	59.13	61.61
OQU89253	Sorghum	plasma membrane	56.97	59.55
TraesCS1A01G373000.1	Wheat	peroxisome	62.54	57.71
TraesCS1D01G379800.1	Wheat	peroxisome	62.54	57.55
HORVU1Hr1G082900.12	Barley	peroxisome	61.3	56.9
KXG33171	Sorghum	plasma membrane	63.47	56.63
OQU86360	Sorghum	plasma membrane	51.7	54.4
KXG33063	Sorghum	mitochondrion, plastid	61.61	51.82

Protein Annotations

Gene3D:1.20.144.10	MapMan:5.2.2.1	EntrezGene:8082440	UniProt:C5Z5T0	EnsemblPlants:EER90037	ProteinID:EER90037
ProteinID:EER90037.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0008195	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311	GO:GO:0016787
PFAM:PF01569	PANTHER:PTHR10165	PANTHER:PTHR10165:SF99	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	SMART:SM00014
EnsemblPlantsGene:SORBI_3010G190300	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0001A899D1	RefSeq:XP_002438670.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:53128017..53130382

Molecular Weight (calculated)

35735.1 Da

IEP (calculated)

8.071

GRAVY (calculated)

0.111

Length

323 amino acids

Sequence
(BLAST)

001: MPPPPPATAT ARPQVYLKSH GTRVARPHLL DWVVLIFLVA VDGALNFIEP FHRFVGADMM PGLRYPLKDN TVPVWAVPVV AVVVPVAIIA GIYVRRRNAY
101: DLHHAILGLL FSVLITAVLT DAIKDGVGRP RPNFFWRCFP DGLPEYHNVT RAAICHGDPA VVKEGYKSFP SGHTSWSFAG LGFLSWYLAG KIRAFDRRGH
201: VAKLCIVALP LLLAAMVAVS RVDDYWHHWQ DVFTAGVLGL VVASFCYLQF FPPPSGEQGF WPHSYFEHIL SLEGEIQVQS TADDSSPQHP SLTLDSSPGR
301: ELRTTSQALA SMESGDHRSH RSQ

Best Arabidopsis Sequence Match ( AT1G15080.1 )
(BLAST)

001: MPEIHLGAHT IRSHGVTVAR FHMHDWLILL LLIVIEIVLN VIEPFHRFVG EDMLTDLRYP LQDNTIPFWA VPLIAVVLPF AVICVYYFIR NDVYDLHHAI
101: LGLLFSVLIT GVITDAIKDA VGRPRPDFFW RCFPDGIGIF HNVTKNVLCT GAKDVVKEGH KSFPSGHTSW SFAGLGFLSL YLSGKIRVFD QRGHVAKLCI
201: VILPLLVAAL VGVSRVDDYW HHWQDVFGGA IIGLTVATFC YLQFFPPPYD PDGWGPHAYF QMLADSRNDV QDSAGMNHLS VRQTELESVR

Arabidopsis Description

LPP2Lipid phosphate phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI60]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.