Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- plastid 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G373000.1 | Wheat | peroxisome | 93.1 | 92.57 |
| TraesCS1D01G379800.1 | Wheat | peroxisome | 93.1 | 92.31 |
| TraesCS1B01G393200.1 | Wheat | plasma membrane | 83.62 | 91.22 |
| Os05t0549900-00 | Rice | plasma membrane | 49.14 | 69.8 |
| HORVU7Hr1G081700.5 | Barley | plasma membrane | 57.18 | 62.58 |
| Zm00001d038908_P004 | Maize | peroxisome | 59.2 | 62.24 |
| EER90037 | Sorghum | plasma membrane | 56.9 | 61.3 |
| HORVU3Hr1G064450.7 | Barley | peroxisome, plasma membrane | 54.02 | 59.12 |
| HORVU3Hr1G060600.6 | Barley | plasma membrane | 56.03 | 56.2 |
| HORVU7Hr1G014130.1 | Barley | plastid | 53.45 | 50.54 |
| HORVU5Hr1G055070.2 | Barley | plastid | 54.89 | 48.97 |
| HORVU3Hr1G008430.3 | Barley | plastid | 43.68 | 40.11 |
Protein Annotations
| EMBL:AK361651 | EMBL:AK363951 | EnsemblPlants:HORVU1Hr1G082900.12 | EnsemblPlantsGene:HORVU1Hr1G082900 | Gene3D:1.20.144.10 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR10165 | PANTHER:PTHR10165:SF99 |
| PFAM:PF01569 | SEG:seg | SMART:SM00014 | SUPFAM:SSF48317 | TMHMM:TMhelix | UniParc:UPI0002962011 |
| UniProt:M0X5S3 | MapMan:5.2.2.1 | : | : | : | : |
Description
Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0X5S3]
Coordinates
chrchr1H:+:530744794..530746868
Molecular Weight (calculated)
38649.4 Da
IEP (calculated)
8.580
GRAVY (calculated)
0.131
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: METAGPAGDP PGESIESPLL PAPETKMPAP GQAAAVRLGV PPPYLRTHGP KMARRHMYDW IVLLLLAAIE VVLNVITPFH RFVAEFMMDD LRYPMKPNTI
101: PVWAVPIYAV ILPMLIFAVI YVKKKNAYDL HHAILGLLFS VLITGVLTDA IKDGVGRPRP NFYYRCFPDG VPNYEAITRQ VICHGDAKVI KEGHKSFPSG
201: HTSWSFAGLG FLSWYLAGKI RVFDRGGHIA KLCIVILPLL FAAMVGVSRV ADYWHHWQDV FAGGILGLVV ASFCYLQFFP HPASKKGLWP HAFHLHNLNP
301: ETENQVTTDT HQSGLPHDLS MVPYVPSMEM RTNGRALDNM EAGGGRVW
101: PVWAVPIYAV ILPMLIFAVI YVKKKNAYDL HHAILGLLFS VLITGVLTDA IKDGVGRPRP NFYYRCFPDG VPNYEAITRQ VICHGDAKVI KEGHKSFPSG
201: HTSWSFAGLG FLSWYLAGKI RVFDRGGHIA KLCIVILPLL FAAMVGVSRV ADYWHHWQDV FAGGILGLVV ASFCYLQFFP HPASKKGLWP HAFHLHNLNP
301: ETENQVTTDT HQSGLPHDLS MVPYVPSMEM RTNGRALDNM EAGGGRVW
001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.