Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G260400.1 | Wheat | plasma membrane | 79.87 | 86.39 |
| TraesCS3B01G293300.1 | Wheat | plasma membrane | 79.56 | 86.05 |
| TraesCS3A01G260300.1 | Wheat | plasma membrane | 78.93 | 85.37 |
| Os01t0693300-01 | Rice | plasma membrane | 76.73 | 75.78 |
| KXG33171 | Sorghum | plasma membrane | 74.53 | 65.47 |
| HORVU7Hr1G081700.5 | Barley | plasma membrane | 58.8 | 58.8 |
| Zm00001d011638_P002 | Maize | mitochondrion, plasma membrane | 73.58 | 58.06 |
| HORVU1Hr1G082900.12 | Barley | peroxisome | 59.12 | 54.02 |
| HORVU3Hr1G060600.6 | Barley | plasma membrane | 57.55 | 52.74 |
| HORVU7Hr1G014130.1 | Barley | plastid | 58.8 | 50.82 |
| HORVU5Hr1G055070.2 | Barley | plastid | 60.69 | 49.49 |
| HORVU3Hr1G008430.3 | Barley | plastid | 48.74 | 40.9 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G064450.7 | EnsemblPlantsGene:HORVU3Hr1G064450 | Gene3D:1.20.144.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR10165 | PANTHER:PTHR10165:SF99 | PFAM:PF01569 | SEG:seg |
| SMART:SM00014 | SUPFAM:SSF48317 | TMHMM:TMhelix | UniParc:UPI000B47C809 | UniProt:A0A287LCY5 | MapMan:5.2.2.1 |
Description
No Description!
Coordinates
chrchr3H:+:491848648..491851148
Molecular Weight (calculated)
35215.9 Da
IEP (calculated)
8.574
GRAVY (calculated)
0.140
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: WDWEVMPSPS APIRVAVPPP CITSDGAKMA RLHMYDWIVL VLLVVVDGVL NKIEPFHRFV GSDMLTDLRY PMKDNTVPFW TVPIYGIIGP IIIITSIYIK
101: RRNVYDLHHA ILGLLFSVAI TAVLTDAIKN GVGRPRPDFF WRCFPDGVPA YDNVTTGVLC HGKASDIKEG HKSFPSGHTS LSFAGLGFLS WYLAGKIKVF
201: DRRGHVAKLC IIFLPLLGAA LVAISRVDDY RHHWQDVCTG GVLGLVVASL CYLQFFPLPS DENGVYGLTH TPGTFITRKG RTQVQPTAMH RQNSVRNGSF
301: EGPDGLETGL DSMDVGRR
101: RRNVYDLHHA ILGLLFSVAI TAVLTDAIKN GVGRPRPDFF WRCFPDGVPA YDNVTTGVLC HGKASDIKEG HKSFPSGHTS LSFAGLGFLS WYLAGKIKVF
201: DRRGHVAKLC IIFLPLLGAA LVAISRVDDY RHHWQDVCTG GVLGLVVASL CYLQFFPLPS DENGVYGLTH TPGTFITRKG RTQVQPTAMH RQNSVRNGSF
301: EGPDGLETGL DSMDVGRR
001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.