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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • endoplasmic reticulum 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G546500.1 Wheat plasma membrane 80.98 89.49
TraesCS3D01G242700.1 Wheat plasma membrane 83.57 88.69
TraesCS3B01G270800.1 Wheat plasma membrane 80.69 88.61
TraesCS3A01G242700.1 Wheat plasma membrane 81.84 79.33
Os01t0666000-01 Rice plasma membrane 64.55 75.93
Zm00001d043947_P001 Maize plasma membrane 50.43 72.92
KXG33063 Sorghum mitochondrion, plastid 68.59 61.98
HORVU7Hr1G081700.5 Barley plasma membrane 54.18 59.12
HORVU3Hr1G064450.7 Barley peroxisome, plasma membrane 52.74 57.55
HORVU1Hr1G082900.12 Barley peroxisome 56.2 56.03
HORVU7Hr1G014130.1 Barley plastid 51.59 48.64
HORVU5Hr1G055070.2 Barley plastid 53.03 47.18
HORVU3Hr1G008430.3 Barley plastid 45.82 41.95
Protein Annotations
EnsemblPlants:HORVU3Hr1G060600.6EnsemblPlantsGene:HORVU3Hr1G060600Gene3D:1.20.144.10GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:P_Acid_Pase_2/haloperoxi_sfInterPro:P_Acid_Pase_2/haloperoxidasePANTHER:PTHR10165PANTHER:PTHR10165:SF99PFAM:PF01569SEG:seg
SMART:SM00014SUPFAM:SSF48317TMHMM:TMhelixUniParc:UPI000B462C63UniProt:A0A287L9E2MapMan:5.2.2.1
Description
No Description!
Coordinates
chrchr3H:-:461609621..461614314
Molecular Weight (calculated)
38189.1 Da
IEP (calculated)
7.369
GRAVY (calculated)
0.288
Length
347 amino acids
Sequence
(BLAST)
001: MQAPAGTNAP ACPSPAMLSH GVRIARSHAY DWVALLLLVA VEGVLNAIEP FHRFVGEDMI ADLRYPMKSN TVPVWAVAVR ATPPACLPCL SFKFENYTSP
101: ELEVYLSVFT QVVAVIVPVL IFVAIYIWRR NAYDLHHAIL GILFSVLITG VLTDAIKDAV GRPRPNFFWR CFPDGIAVYD NITTAVICHG DASVIKEGHK
201: SFPSGHSSWS FAGLGFLSWY LAGKVAVFDR RGHVAKLCVV ILPLLVAAVI AISRVDDYWH HWQDVFAGGI LGMVVASVCY LQFFPPPSGD KGFWPHAHFK
301: YVSEREEESR RRRATEMSNS DSTAVVPWQG VAGANTSRTL DAMESGT
Best Arabidopsis Sequence Match ( AT3G02600.10 )
(BLAST)
001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.