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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G339000.1 Wheat plasma membrane 92.14 92.14
TraesCS7B01G241600.1 Wheat plasma membrane 91.51 91.51
TraesCS7A01G330800.1 Wheat endoplasmic reticulum, golgi, plasma membrane, plastid 90.25 90.25
EER90050 Sorghum plastid 80.5 79.75
HORVU3Hr1G064450.7 Barley peroxisome, plasma membrane 58.8 58.8
HORVU1Hr1G082900.12 Barley peroxisome 62.58 57.18
HORVU3Hr1G060600.6 Barley plasma membrane 59.12 54.18
HORVU7Hr1G014130.1 Barley plastid 54.09 46.74
HORVU5Hr1G055070.2 Barley plastid 56.29 45.9
HORVU3Hr1G008430.3 Barley plastid 50.31 42.22
Protein Annotations
EnsemblPlants:HORVU7Hr1G081700.5EnsemblPlantsGene:HORVU7Hr1G081700Gene3D:1.20.144.10GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:P_Acid_Pase_2/haloperoxi_sfInterPro:P_Acid_Pase_2/haloperoxidasePANTHER:PTHR10165PANTHER:PTHR10165:SF99PFAM:PF01569SEG:seg
SMART:SM00014SUPFAM:SSF48317TMHMM:TMhelixUniParc:UPI000B476F9FUniProt:A0A287X323MapMan:5.2.2.1
Description
No Description!
Coordinates
chrchr7H:+:486783680..486785862
Molecular Weight (calculated)
35141.7 Da
IEP (calculated)
8.022
GRAVY (calculated)
0.178
Length
318 amino acids
Sequence
(BLAST)
001: MPPPATPAPS AAVHPCLRTH GKEVARLHLS DWIVLLLLVA TTGVLGLVQP FHRFVAQDMM SDLRYPVKGS TVPDWAVPVI AVVAPMAFIL GIYIKRRNVY
101: DLHHAILGLL FSVLITAILT VAVKDAVGRP RPDFFWRCFP DGVPKYNNVT GDVICHGKPG VIKEGYKSFP SGHASAAFAG LGFLSWYLAG KLKAFDRRGH
201: VAKLCIVLLP LLLATMVAIS RVTDYWHHWQ DVFAGGVLGL VVASFCYLQF FPPPYSEHGM WPHAYLEHVH LPEGEMQVQS TTNSDIHHNS LSLDLSRSNE
301: TRTTSHALDS MEEGSRDH
Best Arabidopsis Sequence Match ( AT3G02600.10 )
(BLAST)
001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.