Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G241600.1 | Wheat | plasma membrane | 93.08 | 93.08 |
| TraesCS7D01G339000.1 | Wheat | plasma membrane | 93.08 | 93.08 |
| HORVU7Hr1G081700.5 | Barley | plasma membrane | 90.25 | 90.25 |
| EER90050 | Sorghum | plastid | 80.82 | 80.06 |
| TraesCS3A01G260300.1 | Wheat | plasma membrane | 56.6 | 61.22 |
| TraesCS5A01G180300.1 | Wheat | plasma membrane | 57.55 | 58.65 |
| TraesCS1A01G373000.1 | Wheat | peroxisome | 63.84 | 58.0 |
| TraesCS2A01G485500.1 | Wheat | plasma membrane | 54.4 | 53.23 |
| TraesCS4A01G417500.1 | Wheat | plasma membrane | 49.37 | 53.04 |
| TraesCS3A01G242700.1 | Wheat | plasma membrane | 56.29 | 50.0 |
| TraesCS3A01G052100.2 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 50.63 | 48.94 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G330800.1 | EnsemblPlantsGene:TraesCS7A01G330800 | Gene3D:1.20.144.10 | InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR10165 |
| PANTHER:PTHR10165:SF99 | PFAM:PF01569 | SEG:seg | SMART:SM00014 | SUPFAM:SSF48317 | TIGR:cd03390 |
| TMHMM:TMhelix | MapMan:5.2.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:483965381..483971156
Molecular Weight (calculated)
35427.1 Da
IEP (calculated)
8.486
GRAVY (calculated)
0.125
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPATPAPS ATVHPCLRTH GKEVARLHLF DWIVLLLLVA TIGLLGLVQP FHRFVSQDMM ADLRYPMKRS TVPDWAVPVI AVVVPMVFIV GIYIKRRNVY
101: DLHHAILGLL FSVLITAIVT VAIKDAVGRP RPDFFWRCFP DGVPKYDNVT GDVICHGKPG AIKEGYKSFP SGHASGAFAG LGFLSWYLAG KMKAFDRRGH
201: IAKLCIVLLP LLSATMVAVS RVTDYWHHWQ DVFAGGVLGW VVASFCYLQF FPPPYSEHGV WPHAYLEHIR RPEGEMHVQS TTNSNMHHNS LPLDLSGSNE
301: TRTTSHALDS MEEGSRDQ
101: DLHHAILGLL FSVLITAIVT VAIKDAVGRP RPDFFWRCFP DGVPKYDNVT GDVICHGKPG AIKEGYKSFP SGHASGAFAG LGFLSWYLAG KMKAFDRRGH
201: IAKLCIVLLP LLSATMVAVS RVTDYWHHWQ DVFAGGVLGW VVASFCYLQF FPPPYSEHGV WPHAYLEHIR RPEGEMHVQS TTNSNMHHNS LPLDLSGSNE
301: TRTTSHALDS MEEGSRDQ
001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.