Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G339000.1 | Wheat | plasma membrane | 95.91 | 95.91 |
| TraesCS7A01G330800.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane, plastid | 93.08 | 93.08 |
| HORVU7Hr1G081700.5 | Barley | plasma membrane | 91.51 | 91.51 |
| EER90050 | Sorghum | plastid | 81.13 | 80.37 |
| TraesCS1B01G393200.1 | Wheat | plasma membrane | 62.89 | 62.7 |
| TraesCS3B01G293300.1 | Wheat | plasma membrane | 56.6 | 61.22 |
| TraesCS3B01G270800.1 | Wheat | plasma membrane | 56.92 | 57.28 |
| TraesCS5B01G546500.1 | Wheat | plasma membrane | 55.97 | 56.69 |
| TraesCS5B01G178200.1 | Wheat | plasma membrane | 56.29 | 56.11 |
| TraesCS3B01G060600.1 | Wheat | peroxisome | 50.31 | 48.63 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G241600.1 | EnsemblPlantsGene:TraesCS7B01G241600 | Gene3D:1.20.144.10 | InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR10165 |
| PANTHER:PTHR10165:SF99 | PFAM:PF01569 | SEG:seg | SMART:SM00014 | SUPFAM:SSF48317 | TIGR:cd03390 |
| TMHMM:TMhelix | MapMan:5.2.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:449546458..449548459
Molecular Weight (calculated)
35216.8 Da
IEP (calculated)
8.479
GRAVY (calculated)
0.097
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPATPAPS AAVQPCLRTH GKEVARLHLF DWIVLLLLVA TTGALGLVQP FHRFVAQDMM SDLRYPMKGS TVPDWAVPVI AIVVPMVFIV GTYIKRRNVY
101: DLHHATLGLL FSVLITAIVT VAIKDAVGRP RPDFFWRCFP DGVPKYNNVT RDVICDGKPG VIKEGYKSFP SGHASGAFAG LGFLSWYLAG KLKAFDRRGH
201: VAKLCVVLLP LLMATMVAIS RVTDYWHHWQ DVFAGGVLGL VVASFCYLQF FPPPYSEHGV WPHAYLEHIR RPEGEMQGQS TTNSNMHHNS LPLDLSGSNE
301: TRTTSHALDS MEEGSRDQ
101: DLHHATLGLL FSVLITAIVT VAIKDAVGRP RPDFFWRCFP DGVPKYNNVT RDVICDGKPG VIKEGYKSFP SGHASGAFAG LGFLSWYLAG KLKAFDRRGH
201: VAKLCVVLLP LLMATMVAIS RVTDYWHHWQ DVFAGGVLGL VVASFCYLQF FPPPYSEHGV WPHAYLEHIR RPEGEMQGQS TTNSNMHHNS LPLDLSGSNE
301: TRTTSHALDS MEEGSRDQ
001: MPEIHLGAHT IRSHGVTVAR FHMHDWLILL LLIVIEIVLN VIEPFHRFVG EDMLTDLRYP LQDNTIPFWA VPLIAVVLPF AVICVYYFIR NDVYDLHHAI
101: LGLLFSVLIT GVITDAIKDA VGRPRPDFFW RCFPDGIGIF HNVTKNVLCT GAKDVVKEGH KSFPSGHTSW SFAGLGFLSL YLSGKIRVFD QRGHVAKLCI
201: VILPLLVAAL VGVSRVDDYW HHWQDVFGGA IIGLTVATFC YLQFFPPPYD PDGWGPHAYF QMLADSRNDV QDSAGMNHLS VRQTELESVR
101: LGLLFSVLIT GVITDAIKDA VGRPRPDFFW RCFPDGIGIF HNVTKNVLCT GAKDVVKEGH KSFPSGHTSW SFAGLGFLSL YLSGKIRVFD QRGHVAKLCI
201: VILPLLVAAL VGVSRVDDYW HHWQDVFGGA IIGLTVATFC YLQFFPPPYD PDGWGPHAYF QMLADSRNDV QDSAGMNHLS VRQTELESVR
Arabidopsis Description
LPP2Lipid phosphate phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI60]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.