Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G270800.1 | Wheat | plasma membrane | 90.76 | 90.19 |
| HORVU3Hr1G060600.6 | Barley | plasma membrane | 89.49 | 80.98 |
| Os01t0666000-01 | Rice | plasma membrane | 71.97 | 76.61 |
| Zm00001d043947_P001 | Maize | plasma membrane | 55.1 | 72.08 |
| TraesCS3B01G293300.1 | Wheat | plasma membrane | 59.24 | 63.27 |
| KXG33063 | Sorghum | mitochondrion, plastid | 75.16 | 61.46 |
| TraesCS1B01G393200.1 | Wheat | plasma membrane | 61.47 | 60.5 |
| TraesCS5B01G178200.1 | Wheat | plasma membrane | 58.28 | 57.37 |
| TraesCS7B01G241600.1 | Wheat | plasma membrane | 56.69 | 55.97 |
| TraesCS3B01G060600.1 | Wheat | peroxisome | 49.36 | 47.11 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G546500.1 | EnsemblPlantsGene:TraesCS5B01G546500 | Gene3D:1.20.144.10 | InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR10165 |
| PANTHER:PTHR10165:SF99 | PFAM:PF01569 | SEG:seg | SMART:SM00014 | SUPFAM:SSF48317 | TIGR:cd03390 |
| TMHMM:TMhelix | MapMan:5.2.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:699720736..699725433
Molecular Weight (calculated)
34836.1 Da
IEP (calculated)
8.247
GRAVY (calculated)
0.188
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAPAGTNAP ACRFTTTWSH GVRILRSHAY DWAALLLLIG VEGILNAIER FHRFVGEGMI ADLRYPMKSN TVPVWAVAIV AVIAPMLIFI AVYIWRRNAY
101: DLHHAILGIL FSVLITGVLT DAIKDAVGRP RPNFFWRCFP DGIAVYDNIT TAVICHGDAS VIKEGHKSFP SGHSSWSFAG LGFLSWYLAG KITVFDRRGH
201: VAKLCAVILP LLVAALIAIS RVDDYWHHWQ DVFAGGILGM VVASVCYLQF FPPPSDDKGF WPHAHFRDIN EREEEIRRRR TTEMSNSGST AVVPRQGETG
301: ANTSRTLDAM ESGT
101: DLHHAILGIL FSVLITGVLT DAIKDAVGRP RPNFFWRCFP DGIAVYDNIT TAVICHGDAS VIKEGHKSFP SGHSSWSFAG LGFLSWYLAG KITVFDRRGH
201: VAKLCAVILP LLVAALIAIS RVDDYWHHWQ DVFAGGILGM VVASVCYLQF FPPPSDDKGF WPHAHFRDIN EREEEIRRRR TTEMSNSGST AVVPRQGETG
301: ANTSRTLDAM ESGT
001: MPEIHLGAHT IRSHGVTVAR FHMHDWLILL LLIVIEIVLN VIEPFHRFVG EDMLTDLRYP LQDNTIPFWA VPLIAVVLPF AVICVYYFIR NDVYDLHHAI
101: LGLLFSVLIT GVITDAIKDA VGRPRPDFFW RCFPDGIGIF HNVTKNVLCT GAKDVVKEGH KSFPSGHTSW SFAGLGFLSL YLSGKIRVFD QRGHVAKLCI
201: VILPLLVAAL VGVSRVDDYW HHWQDVFGGA IIGLTVATFC YLQFFPPPYD PDGWGPHAYF QMLADSRNDV QDSAGMNHLS VRQTELESVR
101: LGLLFSVLIT GVITDAIKDA VGRPRPDFFW RCFPDGIGIF HNVTKNVLCT GAKDVVKEGH KSFPSGHTSW SFAGLGFLSL YLSGKIRVFD QRGHVAKLCI
201: VILPLLVAAL VGVSRVDDYW HHWQDVFGGA IIGLTVATFC YLQFFPPPYD PDGWGPHAYF QMLADSRNDV QDSAGMNHLS VRQTELESVR
Arabidopsis Description
LPP2Lipid phosphate phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI60]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.