Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- endoplasmic reticulum 2
- extracellular 1
- golgi 1
- plasma membrane 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G339000.1 | Wheat | plasma membrane | 81.62 | 82.39 |
| TraesCS7B01G241600.1 | Wheat | plasma membrane | 80.37 | 81.13 |
| TraesCS7A01G330800.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane, plastid | 80.06 | 80.82 |
| HORVU7Hr1G081700.5 | Barley | plasma membrane | 79.75 | 80.5 |
| EES19904 | Sorghum | plasma membrane | 68.22 | 67.18 |
| EER90037 | Sorghum | plasma membrane | 66.67 | 66.25 |
| KXG24994 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 59.5 | 61.61 |
| OQU89253 | Sorghum | plasma membrane | 57.01 | 59.22 |
| KXG33171 | Sorghum | plasma membrane | 62.93 | 55.8 |
| OQU86360 | Sorghum | plasma membrane | 51.09 | 53.42 |
| KXG33063 | Sorghum | mitochondrion, plastid | 58.88 | 49.22 |
Protein Annotations
| Gene3D:1.20.144.10 | MapMan:5.2.2.1 | EntrezGene:8083459 | UniProt:C5Z648 | EnsemblPlants:EER90050 | ProteinID:EER90050 |
| ProteinID:EER90050.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008195 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016311 | GO:GO:0016787 |
| PFAM:PF01569 | PANTHER:PTHR10165 | PANTHER:PTHR10165:SF99 | InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | SMART:SM00014 |
| EnsemblPlantsGene:SORBI_3010G193300 | SUPFAM:SSF48317 | TMHMM:TMhelix | UniParc:UPI0001A899DE | RefSeq:XP_002438683.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:-:53532760..53534698
Molecular Weight (calculated)
35521.3 Da
IEP (calculated)
8.480
GRAVY (calculated)
0.217
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPPATPASG AAAAAMRPYL TTHGKQVARL HLFDWIVLLL LIAMYAVLGR LQPFHRFVAE DMMASLRYPM KGNTVPSWAV PIIAIVVPMI FMVGIYIKRR
101: NVYDLHHAIL GLLFSVLITA ILTVAIKDAV GWPRPDFFWR CFPDGVPNYN NITGGVICHG QQSVIEEGHK SFPSGHSSGC FSGLGFLSWY LAGKIKAFDR
201: GGHVAKLCIV LLPLLLATMV AVSRVSDYWH HWQDVFAGGV LGLVVASFCY LQFFPPPYSK QGVWPHAYFE HIHQTGGERN IQSTTNANLH HQSLSLDLSG
301: SNEIRTTSHA LDSMEEGSRD Q
101: NVYDLHHAIL GLLFSVLITA ILTVAIKDAV GWPRPDFFWR CFPDGVPNYN NITGGVICHG QQSVIEEGHK SFPSGHSSGC FSGLGFLSWY LAGKIKAFDR
201: GGHVAKLCIV LLPLLLATMV AVSRVSDYWH HWQDVFAGGV LGLVVASFCY LQFFPPPYSK QGVWPHAYFE HIHQTGGERN IQSTTNANLH HQSLSLDLSG
301: SNEIRTTSHA LDSMEEGSRD Q
001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.