CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plastid 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0359200-02	Rice	plasma membrane	88.06	88.06
Os08t0359100-01	Rice	plasma membrane	81.61	81.61
OQU89253	Sorghum	plasma membrane	79.35	79.61
Zm00001d032379_P002	Maize	plasma membrane	94.52	77.51
GSMUA_Achr5P09970_001	Banana	plasma membrane	74.52	72.87
GSMUA_Achr1P05420_001	Banana	cytosol, golgi, plasma membrane	72.26	70.66
GSMUA_Achr6P01340_001	Banana	endoplasmic reticulum, nucleus, peroxisome	73.23	63.76
EES19904	Sorghum	plasma membrane	63.55	60.43
EER90050	Sorghum	plastid	61.61	59.5
EER90037	Sorghum	plasma membrane	61.61	59.13
KXG33171	Sorghum	plasma membrane	68.71	58.84
OQU86360	Sorghum	plasma membrane	55.81	56.35
KXG33063	Sorghum	mitochondrion, plastid	60.32	48.7
KRH45276	Soybean	extracellular	15.16	34.81
CDX94616	Canola	cytosol, golgi, nucleus	20.32	34.05

Protein Annotations

EnsemblPlants:KXG24994	EnsemblPlantsGene:SORBI_3007G108500	Gene3D:1.20.144.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	PANTHER:PTHR10165	PANTHER:PTHR10165:SF105	PFAM:PF01569	ProteinID:KXG24994
ProteinID:KXG24994.1	SEG:seg	SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0001C80C55
UniProt:A0A1B6PH19	MapMan:5.2.2.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:39089200..39093976

Molecular Weight (calculated)

35038.3 Da

IEP (calculated)

6.790

GRAVY (calculated)

0.108

Length

310 amino acids

Sequence
(BLAST)

001: MPDIQLGCHT IQSHGTKVAR LHMYDWIILL CLAVFDGLLN LIEPFHRFVG RDMMTDLSYP LKGNTIPFWA VPLIAIVLPW FIFGVIYFKK KNVYDLHHGI
101: LGILYSVLIT AVITDAIKDG VGRPRPDFFW RCFPDGKPNY DNITTDVICH GEKSVIKEGH KSFPSGHSSW SFAGLGFLAW YLAGKLKAFD RKGHIAKLCL
201: VFLPLLVASL VAVSRVDDYW HHWQDVFAGG ILGLTVASFC YLQFFPFPFD NDALWPHAYF QQLAETHSNG NANSINIRPT ESEDEQEDHG GIALRDTSPI
301: LESMESGRRL

Best Arabidopsis Sequence Match ( AT3G02600.6 )
(BLAST)

001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.