Factsheet for GSMUA_Achr6P01340_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, peroxisome

Predictor Summary:

nucleus 2
peroxisome 1
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P05420_001	Banana	cytosol, golgi, plasma membrane	74.72	83.91
GSMUA_Achr5P09970_001	Banana	plasma membrane	74.16	83.28
Os09t0308900-01	Rice	cytosol	64.04	74.27
GSMUA_Achr3P01450_001	Banana	plasma membrane	65.45	73.5
Os08t0359200-02	Rice	plasma membrane	63.76	73.23
KXG24994	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	63.76	73.23
OQU89253	Sorghum	plasma membrane	62.08	71.52
Zm00001d020040_P003	Maize	plasma membrane	61.8	71.2
TraesCS5A01G180300.1	Wheat	plasma membrane	61.8	70.51
TraesCS5D01G184800.1	Wheat	plasma membrane	61.8	70.51
TraesCS5B01G178200.1	Wheat	plasma membrane	61.8	68.97
Os08t0359100-01	Rice	plasma membrane	59.27	68.06
Zm00001d005579_P003	Maize	golgi, plasma membrane, plastid	62.64	65.4
TraesCS4A01G417500.1	Wheat	plasma membrane	53.65	64.53
TraesCS2A01G485500.1	Wheat	plasma membrane	58.71	64.31
TraesCS3D01G058900.1	Wheat	plasma membrane	58.43	64.0
TraesCS7D01G066700.2	Wheat	plasma membrane	58.43	62.28
Zm00001d032379_P002	Maize	plasma membrane	63.2	59.52
GSMUA_Achr8P18310_001	Banana	plasma membrane	50.28	58.69
HORVU5Hr1G055070.2	Barley	plastid	62.08	56.67
HORVU7Hr1G014130.1	Barley	plastid	58.43	56.52
GSMUA_Achr10P...	Banana	plasma membrane	50.56	55.38
GSMUA_Achr6P01360_001	Banana	mitochondrion	42.7	42.46
CDX94616	Canola	cytosol, golgi, nucleus	18.54	35.68
KRH45276	Soybean	extracellular	13.2	34.81
GSMUA_Achr2P22590_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	68.26	25.05

Protein Annotations

EnsemblPlants:GSMUA_Achr6P01340_001	EnsemblPlants:GSMUA_Achr6T01340_001	EnsemblPlantsGene:GSMUA_Achr6G01340_001	Gene3D:1.20.144.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	PANTHER:PTHR10165	PANTHER:PTHR10165:SF110	PFAM:PF01569
SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0002956CEC	UniProt:M0T382	MapMan:5.2.2.1

Description

Lipid phosphate phosphatase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G01340_001]

Coordinates

chr6:+:885041..891953

Molecular Weight (calculated)

39942.0 Da

IEP (calculated)

6.752

GRAVY (calculated)

0.008

Length

356 amino acids

Sequence
(BLAST)

001: MSITEAEDGE GEGSVSACSD EPLLPCPHNT LSLIRQRKSE KMPDIQLGTH TVRSHGTQVA RFHMHDWFIL ILLAIIDGCL NIIEPFHRFV GRDMMTDLRY
101: PLKSNTVPFW AVPLIGILLP FAIIIGIYVK RKNVYDLHNA VLGLLFSVLI TGVLTDAIKD AVGRPRPDFF WRCFPDGKAV YDNITTNVIC HGDNSVIKEG
201: HKSFPSGHSS WSFAGLGFLS WYLAGKLKAF DRRGHVAKLC IVFLPLLCAS LIAISRVDDY WHHWQDVFTG GFLGLVIASF CYLQFFPPPY DIDGWFPHAY
301: LHAMADSRHN DQPTANPLQS RPSEIETVYV SSEGQDGIHS RDTSSILDSM EAGRRQ

Best Arabidopsis Sequence Match ( AT1G15080.1 )
(BLAST)

001: MPEIHLGAHT IRSHGVTVAR FHMHDWLILL LLIVIEIVLN VIEPFHRFVG EDMLTDLRYP LQDNTIPFWA VPLIAVVLPF AVICVYYFIR NDVYDLHHAI
101: LGLLFSVLIT GVITDAIKDA VGRPRPDFFW RCFPDGIGIF HNVTKNVLCT GAKDVVKEGH KSFPSGHTSW SFAGLGFLSL YLSGKIRVFD QRGHVAKLCI
201: VILPLLVAAL VGVSRVDDYW HHWQDVFGGA IIGLTVATFC YLQFFPPPYD PDGWGPHAYF QMLADSRNDV QDSAGMNHLS VRQTELESVR

Arabidopsis Description

LPP2Lipid phosphate phosphatase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI60]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.