Factsheet for TraesCS2A01G485500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G417500.1	Wheat	plasma membrane	87.38	95.95
TraesCS3D01G058900.1	Wheat	plasma membrane	95.38	95.38
TraesCS7D01G066700.2	Wheat	plasma membrane	95.38	92.81
TraesCS5A01G180300.1	Wheat	plasma membrane	84.62	88.14
Os09t0308900-01	Rice	cytosol	80.31	85.02
OQU89253	Sorghum	plasma membrane	77.85	81.88
Zm00001d020040_P003	Maize	plasma membrane	76.92	80.91
HORVU7Hr1G014130.1	Barley	plastid	88.0	77.72
Zm00001d005579_P003	Maize	golgi, plasma membrane, plastid	77.23	73.61
GSMUA_Achr1P05420_001	Banana	cytosol, golgi, plasma membrane	64.62	66.25
GSMUA_Achr5P09970_001	Banana	plasma membrane	64.62	66.25
TraesCS3A01G260300.1	Wheat	plasma membrane	57.54	63.61
GSMUA_Achr6P01340_001	Banana	endoplasmic reticulum, nucleus, peroxisome	64.31	58.71
TraesCS7A01G330800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane, plastid	53.23	54.4
TraesCS1A01G373000.1	Wheat	peroxisome	57.23	53.14
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	49.54	48.94
TraesCS3A01G242700.1	Wheat	plasma membrane	53.85	48.88
CDX94616	Canola	cytosol, golgi, nucleus	19.38	34.05
KRH45276	Soybean	extracellular	13.85	33.33

Protein Annotations

EnsemblPlants:TraesCS2A01G485500.1	EnsemblPlantsGene:TraesCS2A01G485500	Gene3D:1.20.144.10	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	PANTHER:PTHR10165
PANTHER:PTHR10165:SF110	PFAM:PF01569	SEG:seg	SMART:SM00014	SUPFAM:SSF48317	TIGR:cd03390
TMHMM:TMhelix	MapMan:5.2.2.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:720385659..720388102

Molecular Weight (calculated)

36175.7 Da

IEP (calculated)

6.433

GRAVY (calculated)

0.165

Length

325 amino acids

Sequence
(BLAST)

001: MADIQLSRYT IKSHGAKIAR LHMYDWIILV LLAVIDGLLN IIEPFHRFVG KDMMTDLRYP LQGNTVPFWA VPVIGIVLPC AIFGGIYFKK KNFYDLHHGI
101: LGILYSVLIT AVITDAIKDG VGRPRPDFFW RCFPDGKDLY DNVTTGVLCH GEKSVIKEGH KSFPSGHASW SFAGLGFLTW YLTGKIAVFD RKGHIAKLCI
201: IVLPLLTAAL VAVSRVDDYW HHWQDVFAGA IIGLTVASFC YLQFFPYPFD TDGLWPYAYN TLQLAEAGIA ANSFSVRPTE ETVEEGQGEG GIALRDAVRP
301: TEETVEEGQG RGGVALRDAL KYDEN

Best Arabidopsis Sequence Match ( AT3G02600.6 )
(BLAST)

001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.