Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G060600.1 | Wheat | peroxisome | 93.62 | 93.62 |
| TraesCS3D01G051000.3 | Wheat | plasma membrane | 97.26 | 84.43 |
| OQU86360 | Sorghum | plasma membrane | 78.12 | 83.71 |
| HORVU3Hr1G008430.3 | Barley | plastid | 92.71 | 80.47 |
| Os01t0139600-01 | Rice | endoplasmic reticulum, peroxisome, plasma membrane | 72.04 | 75.72 |
| Zm00001d008592_P003 | Maize | plasma membrane | 76.9 | 74.85 |
| VIT_14s0006g02480.t01 | Wine grape | plasma membrane | 42.86 | 70.15 |
| GSMUA_Achr8P18310_001 | Banana | plasma membrane | 58.36 | 62.95 |
| Bra001056.1-P | Field mustard | plasma membrane | 52.58 | 57.48 |
| CDX74243 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 55.62 | 57.01 |
| CDX92005 | Canola | plasma membrane | 55.32 | 56.7 |
| Bra024900.1-P | Field mustard | plasma membrane | 49.54 | 56.01 |
| Bra017464.1-P | Field mustard | plasma membrane | 48.94 | 54.03 |
| Solyc05g008810.2.1 | Tomato | nucleus | 52.28 | 53.42 |
| PGSC0003DMT400078535 | Potato | plasma membrane | 52.28 | 53.42 |
| KRH35886 | Soybean | plasma membrane | 54.71 | 53.41 |
| CDY17691 | Canola | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 50.76 | 52.85 |
| PGSC0003DMT400078418 | Potato | plasma membrane | 51.67 | 52.8 |
| KRG90908 | Soybean | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane | 54.41 | 52.49 |
| Solyc05g008820.2.1 | Tomato | plasma membrane | 51.37 | 52.48 |
| Bra039179.1-P | Field mustard | endoplasmic reticulum, golgi, peroxisome | 56.23 | 52.26 |
| KRH01709 | Soybean | mitochondrion | 59.27 | 52.14 |
| TraesCS3A01G260300.1 | Wheat | plasma membrane | 46.5 | 52.04 |
| CDY43231 | Canola | golgi, peroxisome, plasma membrane | 56.53 | 51.38 |
| CDY57538 | Canola | golgi, plasma membrane, plastid | 56.23 | 51.1 |
| AT3G02600.1 | Thale cress | plasma membrane | 56.53 | 51.1 |
| TraesCS5A01G180300.1 | Wheat | plasma membrane | 48.02 | 50.64 |
| TraesCS7A01G330800.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane, plastid | 48.94 | 50.63 |
| CDY25943 | Canola | plastid | 49.54 | 50.46 |
| AT2G01180.3 | Thale cress | plasma membrane | 50.46 | 50.3 |
| CDY41071 | Canola | plasma membrane | 49.85 | 50.15 |
| TraesCS4A01G417500.1 | Wheat | plasma membrane | 44.98 | 50.0 |
| TraesCS2A01G485500.1 | Wheat | plasma membrane | 48.94 | 49.54 |
| Solyc02g086370.2.1 | Tomato | mitochondrion, plasma membrane | 57.14 | 48.58 |
| PGSC0003DMT400078582 | Potato | mitochondrion | 57.14 | 48.33 |
| TraesCS1A01G373000.1 | Wheat | peroxisome | 48.63 | 45.71 |
| TraesCS3A01G242700.1 | Wheat | plasma membrane | 49.54 | 45.53 |
| CDY57516 | Canola | plasma membrane | 23.4 | 38.31 |
| VIT_01s0011g04170.t01 | Wine grape | plasma membrane | 53.5 | 34.78 |
| VIT_01s0011g04160.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 55.32 | 34.4 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G052100.2 | EnsemblPlantsGene:TraesCS3A01G052100 | Gene3D:1.20.144.10 | InterPro:P_Acid_Pase_2/haloperoxi_sf | InterPro:P_Acid_Pase_2/haloperoxidase | PANTHER:PTHR10165 |
| PANTHER:PTHR10165:SF80 | PFAM:PF01569 | SEG:seg | SMART:SM00014 | SUPFAM:SSF48317 | TIGR:cd03390 |
| TMHMM:TMhelix | MapMan:5.2.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:27761557..27763975
Molecular Weight (calculated)
36440.1 Da
IEP (calculated)
9.119
GRAVY (calculated)
0.029
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGGRNTQNC AQTTEGLGAP VSGQPARMQQ VQHTVQTHGY GLARKHTYDW VVLILLAAVV VVLHYAPPFN RFVGKDMMTD IRYPVKPSTV PAWAVPVISM
101: LCPVLVFIAL YVARRDVYDL HHATLGVIFA VLITAAFTDV IKNAVGRPRP DFFWRCFPDG RPVYDQVTGG VICHGEKGFL TDGRKSFPSG HTSWSFAGLG
201: FLSLYLSGKI KAFDRKGHVA KLCIVILPLL LASLVGISRI DNYRHHWEDV FVGGLIGYIM AVLCYLHFFP PPYHHQGWGP YASFHMLEEL EAGNSNNAQN
301: QQSAGQHHIG LTGQHHNGRS RNDLESGSV
101: LCPVLVFIAL YVARRDVYDL HHATLGVIFA VLITAAFTDV IKNAVGRPRP DFFWRCFPDG RPVYDQVTGG VICHGEKGFL TDGRKSFPSG HTSWSFAGLG
201: FLSLYLSGKI KAFDRKGHVA KLCIVILPLL LASLVGISRI DNYRHHWEDV FVGGLIGYIM AVLCYLHFFP PPYHHQGWGP YASFHMLEEL EAGNSNNAQN
301: QQSAGQHHIG LTGQHHNGRS RNDLESGSV
001: MARFSFPCFP NFGGFNQAVT NRGPEISETA DNWVSPSDIP LIEPNSKEHR MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG
Arabidopsis Description
LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.