Factsheet for PGSC0003DMT400078582

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
golgi 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g086370.2.1	Tomato	mitochondrion, plasma membrane	93.32	93.8
VIT_14s0006g02480.t01	Wine grape	plasma membrane	40.1	77.61
CDX92005	Canola	plasma membrane	53.73	65.11
CDX74243	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	52.96	64.17
Bra001056.1-P	Field mustard	plasma membrane	49.61	64.12
KRH01709	Soybean	mitochondrion	60.41	62.83
PGSC0003DMT400078535	Potato	plasma membrane	51.93	62.73
PGSC0003DMT400078418	Potato	plasma membrane	51.67	62.42
OQU86360	Sorghum	plasma membrane	48.07	60.91
PGSC0003DMT400080717	Potato	plasma membrane	43.44	60.79
AT3G02600.1	Thale cress	plasma membrane	56.81	60.71
CDY43231	Canola	golgi, peroxisome, plasma membrane	56.3	60.5
GSMUA_Achr8P18310_001	Banana	plasma membrane	47.3	60.33
Bra039179.1-P	Field mustard	endoplasmic reticulum, golgi, peroxisome	54.76	60.17
CDY57538	Canola	golgi, plasma membrane, plastid	55.78	59.94
PGSC0003DMT400078534	Potato	endoplasmic reticulum, golgi, plasma membrane	48.59	58.51
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	46.79	58.15
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	48.33	57.14
TraesCS3B01G060600.1	Wheat	peroxisome	47.81	56.53
Zm00001d008592_P003	Maize	plasma membrane	48.33	55.62
PGSC0003DMT400025204	Potato	extracellular	10.54	53.95
TraesCS3D01G051000.3	Wheat	plasma membrane	49.61	50.92
HORVU3Hr1G008430.3	Barley	plastid	48.84	50.13

Protein Annotations

Gene3D:1.20.144.10	EntrezGene:102581130	MapMan:5.2.2.1	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	InterPro:LPP1/LPP2/LPP3_plant	UniProt:M1D0E7	PFAM:PF01569	EnsemblPlantsGene:PGSC0003DMG400030590
PGSC:PGSC0003DMG400030590	EnsemblPlants:PGSC0003DMT400078582	PANTHER:PTHR10165	PANTHER:PTHR10165:SF138	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase
SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI0002964D70	RefSeq:XP_006357821.1	SEG:seg

Description

Phosphatidic acid phosphatase alpha [Source:PGSC_GENE;Acc:PGSC0003DMG400030590]

Coordinates

chr2:+:41537051..41541585

Molecular Weight (calculated)

43806.6 Da

IEP (calculated)

8.097

GRAVY (calculated)

0.017

Length

389 amino acids

Sequence
(BLAST)

001: MPWWDLRSVF VFRNFRCFSQ SQNGLSQRLE TSSGFSQLFR PLIAHKKHQQ GRMRDAQPGS HTVNVRSHGV TVASYTVRSH GVTVARTHLN DWLILILLLG
101: IVVLLNAIHP FYRFVGKDMM EDLKYPLKSN TVPIWAVPVY AVLLPMVVFL LLYFRRRDVY DLHHAILGIL FSVVVTAVIT DAIKDAVGRP RPDFFWRCFP
201: DGKEVYDKWG DVVCHGDKNV VREGHKSFPS GHTSLSFAGL GFLSLYLSGK IQVFDCRGHV AKLCLVLLPL LLASLVAISR VDDYWHHWQD VFAGGLIGLV
301: VAALCYLQFF PPPYNDQGWA TYAYFRMLEE SQGTALAANG ENVDANNTCN AEVQIESRQN DRNNNDTFTG ISLSGDSGPT VEDVESGRR

Best Arabidopsis Sequence Match ( AT3G02600.1 )
(BLAST)

001: MARFSFPCFP NFGGFNQAVT NRGPEISETA DNWVSPSDIP LIEPNSKEHR MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.