CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0006g02480.t01	Wine grape	plasma membrane	43.85	81.59
CDX92005	Canola	plasma membrane	59.89	69.78
CDX74243	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	59.09	68.85
Bra001056.1-P	Field mustard	plasma membrane	55.35	68.77
GSMUA_Achr8P18310_001	Banana	plasma membrane	55.08	67.54
CDY43231	Canola	golgi, peroxisome, plasma membrane	64.44	66.57
KRH38169	Soybean	plasma membrane	53.74	66.56
Bra039179.1-P	Field mustard	endoplasmic reticulum, golgi, peroxisome	62.57	66.1
CDY57538	Canola	golgi, plasma membrane, plastid	63.64	65.75
AT3G02600.1	Thale cress	plasma membrane	63.9	65.66
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	54.28	64.86
KRH35886	Soybean	plasma membrane	58.02	64.39
KRG90908	Soybean	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane	58.02	63.64
OQU86360	Sorghum	plasma membrane	52.14	63.52
KRH35882	Soybean	nucleus	54.01	62.73
KRG90909	Soybean	plasma membrane	53.74	62.42
Solyc02g086370.2.1	Tomato	mitochondrion, plasma membrane	63.64	61.5
PGSC0003DMT400078582	Potato	mitochondrion	62.83	60.41
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	52.14	59.27
TraesCS3B01G060600.1	Wheat	peroxisome	51.87	58.97
KRG98223	Soybean	endoplasmic reticulum, extracellular, plasma membrane	45.45	58.42
Zm00001d008592_P003	Maize	plasma membrane	52.14	57.69
TraesCS3D01G051000.3	Wheat	plasma membrane	52.41	51.72
HORVU3Hr1G008430.3	Barley	plastid	51.87	51.19
KRH30180	Soybean	endoplasmic reticulum	37.17	48.26
KRH45276	Soybean	extracellular	13.37	37.04

Protein Annotations

Gene3D:1.20.144.10	EntrezGene:100800585	MapMan:5.2.2.1	EMBL:ACUP02011524	EnsemblPlantsGene:GLYMA_18G293800	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0008152
GO:GO:0008195	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311	GO:GO:0016787
UniProt:K7MVG0	EnsemblPlants:KRH01709	ProteinID:KRH01709	ProteinID:KRH01709.1	InterPro:LPP1/LPP2/LPP3_plant	PFAM:PF01569
PANTHER:PTHR10165	PANTHER:PTHR10165:SF138	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	SMART:SM00014	SUPFAM:SSF48317
TMHMM:TMhelix	UniParc:UPI000233F2A2	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:57166759..57170535

Molecular Weight (calculated)

42330.1 Da

IEP (calculated)

8.371

GRAVY (calculated)

0.014

Length

374 amino acids

Sequence
(BLAST)

001: MASWWDLRPF FRFQSVRTRF QDLSSRRMGI SAVTGAHFSS INFPLIDTKN EEEFRTREVQ LGSHTVSSHG YAVARTHKHD WLILLLLVLI VISLYIIHPF
101: HRFVGKDMMT DLKYPLKSNT VPAWAIPIYA ILLPIVIFLG VYIRRRDVYD LHHAVLGLLF SVLITAVFTE AIKNAVGRPR PDFFWRCFPD GKDVYDKWGD
201: VICHGDQKVI KEGYKSFPSG HTSGSFSGLG FLSLYLSGKI KAFDRKGHVA KLCIVFLPLL VASLVGISRV DDYWHHWQDV FAGGLLGLTV ATFCYLQFFP
301: PPYHSEGWGP YAYFRMLEES RGMTQVPSVQ NSGQAQLAEA QAESQEEQGL HGCMGLTLSR DHHAALNDCE SGRG

Best Arabidopsis Sequence Match ( AT3G02600.1 )
(BLAST)

001: MARFSFPCFP NFGGFNQAVT NRGPEISETA DNWVSPSDIP LIEPNSKEHR MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.