Factsheet for VIT_14s0006g02480.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1
plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92005	Canola	plasma membrane	80.1	50.16
CDX74243	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	79.1	49.53
GSMUA_Achr8P18310_001	Banana	plasma membrane	73.63	48.52
Bra001056.1-P	Field mustard	plasma membrane	72.64	48.51
OQU86360	Sorghum	plasma membrane	71.14	46.58
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	70.65	45.37
Bra039179.1-P	Field mustard	endoplasmic reticulum, golgi, peroxisome	79.6	45.2
VIT_01s0011g04180.t01	Wine grape	plasma membrane	71.64	44.86
CDY43231	Canola	golgi, peroxisome, plasma membrane	80.1	44.48
CDY57538	Canola	golgi, plasma membrane, plastid	79.1	43.92
KRH01709	Soybean	mitochondrion	81.59	43.85
AT3G02600.1	Thale cress	plasma membrane	79.1	43.68
VIT_17s0000g03170.t01	Wine grape	plasma membrane	69.15	43.44
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	70.15	42.86
Zm00001d008592_P003	Maize	plasma membrane	71.14	42.31
TraesCS3B01G060600.1	Wheat	peroxisome	68.66	41.95
Solyc02g086370.2.1	Tomato	mitochondrion, plasma membrane	78.11	40.57
PGSC0003DMT400078582	Potato	mitochondrion	77.61	40.1
TraesCS3D01G051000.3	Wheat	plasma membrane	70.65	37.47
HORVU3Hr1G008430.3	Barley	plastid	68.66	36.41
VIT_01s0011g04170.t01	Wine grape	plasma membrane	78.61	31.23
VIT_01s0011g04160.t01	Wine grape	cytosol, peroxisome, plasma membrane	80.6	30.62

Protein Annotations

Gene3D:1.20.144.10	MapMan:5.2.2.1	ProteinID:CCB57692	ProteinID:CCB57692.1	UniProt:F6HSQ1	EMBL:FN596245
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0008150
GO:GO:0008152	GO:GO:0008195	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311
GO:GO:0016787	InterPro:LPP1/LPP2/LPP3_plant	PFAM:PF01569	PANTHER:PTHR10165	PANTHER:PTHR10165:SF138	InterPro:P_Acid_Pase_2/haloperoxi_sf
InterPro:P_Acid_Pase_2/haloperoxidase	SMART:SM00014	SUPFAM:SSF48317	TMHMM:TMhelix	UniParc:UPI00021085B6	ArrayExpress:VIT_14s0006g02480
EnsemblPlantsGene:VIT_14s0006g02480	EnsemblPlants:VIT_14s0006g02480.t01	RefSeq:XP_002281072	RefSeq:XP_002281072.2	SEG:seg	:

Description

No Description!

Coordinates

chr14:-:20095487..20096689

Molecular Weight (calculated)

22926.1 Da

IEP (calculated)

9.064

GRAVY (calculated)

0.319

Length

201 amino acids

Sequence
(BLAST)

001: MMVDLKYPFK NNTVPIWAVP LYSVLLPITI FLIIYFRRRD VYDLHHAILG LLFSVLVTVV ITDAIKNAVG RPRPDFFWRC FPDGKDVYDR WGNVICHGEK
101: DTIKDGHKSF PSGHTAWSFS GLGFLSLYLS GKIRAFDNRG HVAKLCIVFL PLLVATLVGI SRVDDYRHHW QDVFAGGLLG LVVATFFYLH FFPPPYHAEG
201: L

Best Arabidopsis Sequence Match ( AT3G02600.6 )
(BLAST)

001: MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV
101: LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV
201: ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN
301: PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.