Factsheet for Solyc02g086370.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 4
golgi 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078582	Potato	mitochondrion	93.8	93.32
VIT_14s0006g02480.t01	Wine grape	plasma membrane	40.57	78.11
CDX92005	Canola	plasma membrane	54.26	65.42
CDX74243	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	53.49	64.49
Bra001056.1-P	Field mustard	plasma membrane	49.87	64.12
KRH01709	Soybean	mitochondrion	61.5	63.64
Solyc04g025370.1.1	Tomato	endoplasmic reticulum	25.84	63.29
Solyc05g008810.2.1	Tomato	nucleus	51.94	62.42
GSMUA_Achr8P18310_001	Banana	plasma membrane	48.84	61.97
Solyc05g008820.2.1	Tomato	plasma membrane	51.42	61.8
OQU86360	Sorghum	plasma membrane	48.84	61.56
AT3G02600.1	Thale cress	plasma membrane	57.88	61.54
CDY43231	Canola	golgi, peroxisome, plasma membrane	57.11	61.05
Bra039179.1-P	Field mustard	endoplasmic reticulum, golgi, peroxisome	55.56	60.73
CDY57538	Canola	golgi, plasma membrane, plastid	56.59	60.5
Os01t0139600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	47.55	58.79
Solyc05g008800.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	45.22	58.14
TraesCS3A01G052100.2	Wheat	endoplasmic reticulum, golgi, plasma membrane	48.58	57.14
TraesCS3B01G060600.1	Wheat	peroxisome	48.06	56.53
Zm00001d008592_P003	Maize	plasma membrane	49.1	56.21
Solyc04g025400.2.1	Tomato	mitochondrion, plasma membrane	43.67	53.31
TraesCS3D01G051000.3	Wheat	plasma membrane	49.87	50.92
HORVU3Hr1G008430.3	Barley	plastid	49.1	50.13

Protein Annotations

Gene3D:1.20.144.10	MapMan:5.2.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0008150	GO:GO:0008152	GO:GO:0008195	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016311	GO:GO:0016787	UniProt:K4BBE5	InterPro:LPP1/LPP2/LPP3_plant	PFAM:PF01569
PANTHER:PTHR10165	PANTHER:PTHR10165:SF138	InterPro:P_Acid_Pase_2/haloperoxi_sf	InterPro:P_Acid_Pase_2/haloperoxidase	SMART:SM00014	SUPFAM:SSF48317
EnsemblPlantsGene:Solyc02g086370.2	EnsemblPlants:Solyc02g086370.2.1	TMHMM:TMhelix	UniParc:UPI0002767972	SEG:seg	:

Description

Putative lipid phosphate phosphatase 3, chloroplastic [Source:Projected from Arabidopsis thaliana (AT3G02600) UniProtKB/Swiss-Prot;Acc:Q8LFD1]

Coordinates

chr2:+:49031748..49035285

Molecular Weight (calculated)

43466.4 Da

IEP (calculated)

8.641

GRAVY (calculated)

0.033

Length

387 amino acids

Sequence
(BLAST)

001: MPWWDLRSVF VFKNFRCFSQ SQNGLSQRLE TSAGFSQLFR PLIAHKKHQG RMRDAQPGSH TVSVRSHGVT VASYTVRSHG ITVARTHLND WMILILLLGI
101: VVLLNVIHPF YRFVGKDMME DLKYPLKSNT VPFWAVPVYA VLLPMVVFLL IYFRRRDVYD LHHAILGLLF SVVVTAVITG AIKDAVGRPR PDFFWRCFPD
201: GKEVYDKWGD VVCHGDKNVV REGHKSFPSG HTSLSFAGLG FLSLYLSGKI QVFDCRGHVA KLCLVLLPLL LASLVAISRV DDYWHHWQDV FAGGLIGLVV
301: ATLCYLQFFP PPYNDQGWAT YAYFRMLEES QGAVETSNGE NANANNTCNA EVQIGSQPNH RNNNTFTGIS LSGDSGPTAE DLESGRR

Best Arabidopsis Sequence Match ( AT3G02600.1 )
(BLAST)

001: MARFSFPCFP NFGGFNQAVT NRGPEISETA DNWVSPSDIP LIEPNSKEHR MREAQLGGHT LRSHGMTVAR THMHDWIILV LLVILECVLL IIHPFYRFVG
101: KDMMTDLSYP LKSNTVPIWS VPVYAMLLPL VIFIFIYFRR RDVYDLHHAV LGLLYSVLVT AVLTDAIKNA VGRPRPDFFW RCFPDGKALY DSLGDVICHG
201: DKSVIREGHK SFPSGHTSWS FSGLGFLSLY LSGKIQAFDG KGHVAKLCIV ILPLLFAALV GISRVDDYWH HWQDVFAGGL LGLAISTICY LQFFPPPYHT
301: EGWGPYAYFQ VLEAARVQGA ANGAVQQPPP QVNNGEEEDG GFMGLHLVDN PTMRREEDVE TGRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.