Factsheet for Solyc04g025400.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080717	Potato	plasma membrane	83.6	95.32
Solyc04g025370.1.1	Tomato	endoplasmic reticulum	42.27	84.81
AT3G18220.1	Thale cress	plasma membrane	57.1	58.77
KRG98223	Soybean	endoplasmic reticulum, extracellular, plasma membrane	53.94	58.76
Bra022295.1-P	Field mustard	golgi	53.31	55.41
CDX92215	Canola	golgi	53.31	55.41
CDY24441	Canola	golgi	53.0	55.08
VIT_17s0000g03170.t01	Wine grape	plasma membrane	53.94	53.44
Solyc05g008810.2.1	Tomato	nucleus	51.73	50.93
Solyc05g008820.2.1	Tomato	plasma membrane	49.84	49.07
Solyc05g008800.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	46.37	48.84
KRH30180	Soybean	endoplasmic reticulum	44.16	48.61
Solyc02g086370.2.1	Tomato	mitochondrion, plasma membrane	53.31	43.67
GSMUA_Achr6P01360_001	Banana	mitochondrion	32.49	28.77

Protein Annotations

Gene3D:1.20.144.10	MapMan:5.2.2.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0008195	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311
GO:GO:0016787	UniProt:K4BQY5	PFAM:PF01569	PANTHER:PTHR10165	PANTHER:PTHR10165:SF91	InterPro:P_Acid_Pase_2/haloperoxi_sf
InterPro:P_Acid_Pase_2/haloperoxidase	SMART:SM00014	SUPFAM:SSF48317	EnsemblPlantsGene:Solyc04g025400.2	EnsemblPlants:Solyc04g025400.2.1	TMHMM:TMhelix
UniParc:UPI0002765A2C	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4:-:23567812..23571170

Molecular Weight (calculated)

36505.7 Da

IEP (calculated)

8.994

GRAVY (calculated)

0.130

Length

317 amino acids

Sequence
(BLAST)

001: MYSWKRTKTR NTFPSFIPKL HDSLLNFAFY MCISRRLARM PEIEFGMHTV RSHGAKVAKN HKCDWLILLV LVAMDGFLNY IHPFNRYTNT KMLEDLKFPF
101: KEHDTIPMWA VPIFAVILPC TVFLIYYHYR RDVYDLHHAI LGILYSVLVT AVITDSIKDA VGRPRPNFFY RCFPDGMEAF LPNGDVNCHG DPKVVKEGYK
201: SFPSGHTSWS FAGLAFLSWY LCGKMKAFDR RGHAAKLCIV LLPLLIAALV GISRIDDYWH HWTDVFTGSI IGSVVASLCY LLFFPFPHDI NGWAPHASIK
301: MRENIELQST SVRIDTV

Best Arabidopsis Sequence Match ( AT3G02600.2 )
(BLAST)

001: MARFSFPCFP NFGGFNQHRM REAQLGGHTL RSHGMTVART HMHDWIILVL LVILECVLLI IHPFYRFVGK DMMTDLSYPL KSNTVPIWSV PVYAMLLPLV
101: IFIFIYFRRR DVYDLHHAVL GLLYSVLVTA VLTDAIKNAV GRPRPDFFWR CFPDGKALYD SLGDVICHGD KSVIREGHKS FPSGHTSWSF SGLGFLSLYL
201: SGKIQAFDGK GHVAKLCIVI LPLLFAALVG ISRVDDYWHH WQDVFAGGLL GLAISTICYL QFFPPPYHTE GWGPYAYFQV LEAARVQGAA NGAVQQPPPQ
301: VNNGEEEDGG FMGLHLVDNP TMRREEDVET GRG

Arabidopsis Description

LPP3Putative lipid phosphate phosphatase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LFD1]
SUBAcon: [plasma membrane,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.